FastQCFastQC Report
Fri 30 Jun 2023
SRR10446753_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10446753_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71365163
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length18-95
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT5252980.7360706231414339No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT3914850.548565971887432No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC2184670.30612555316380347No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1593520.22329101945721053No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCCTCTCCCAC1539220.21568226502894694No Hit
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCT1343620.1882739341602849No Hit
CGGGAAACTCGACTGCATAATTTGTGGTAGTG1329840.18634302005307546No Hit
ACGCGAGCCGGGCCCTTCCCGTGGATCGCCTCAGCT1295280.18150032110204808No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC1268190.17770435135137294No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAC1242490.1741031545041101No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCC1174400.16456208472472766No Hit
ACATATACTAAAATTGGAACGATACAGAGAAG1114630.156186849878No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT1093330.15320220035089108No Hit
ACGCGAGCCGGGCCCTTCCCGTGGATCGCCTCAGCTG1088490.15252399829872176No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTC1028930.14417818957409234No Hit
GAATACAAGCTTGGGCTGCAGGTCGACC997080.1397152277225234No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCC975630.13670955953677286No Hit
CTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTC954930.1338089846442304No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC932050.13060293857942987No Hit
GAATACAAGCTTGGGCTGCAGGTCGACCC931610.13054128384741445No Hit
CGGGAAACTCGACTGCATAATTTGTGGTAGTGG927640.12998499001536645No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG917760.12860056103283893No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC904420.1267313016576449No Hit
ACCCGTCGCCGCGCTCTCCCTCTCCCCCC897310.12573501723803251No Hit
GGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT782180.10960249610864056No Hit
ATATACTAAAATTGGAACGATACAGAGAAG759260.10639084506820226No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG754980.1057911126749616No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCT751380.1052866648675629No Hit
CGACGAAGCCGAGCGCACGGGGTCGGCGGCG740830.10380835254310285No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG740480.10375930900627242No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT725480.10165744314211123No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA721990.10116840901771638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)