FastQCFastQC Report
Thu 24 Aug 2023
SRR10530028_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10530028_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55534806
Total Bases5.6 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACAC9984011.797793261400787No Hit
CACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCC9658231.7391309514973368No Hit
CACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCC6786391.2220066096926674No Hit
CCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAA6763471.2178794682383511No Hit
CCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC5925471.0669831096555915No Hit
CATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTAC5669421.0208768893511575No Hit
CTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATC5486380.9879173792378062No Hit
CCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAA5238590.9432985144487585No Hit
CCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC4964030.8938592492787316No Hit
CTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATC4155480.7482658713168099No Hit
ACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT3914270.704831849056968No Hit
CTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAAT3764240.677816358987551No Hit
TCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT3668120.6605082945639533No Hit
ACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACT3562670.6415202026635332No Hit
CTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAAT3484470.627438943425858No Hit
ATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACAAC3421280.6160604936659003No Hit
CACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTCCA3248070.5848710446562108No Hit
TCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCC3101590.5584947933373532No Hit
CACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAAC3078130.5542704155660506No Hit
ACCAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAA3072750.5533016537412591No Hit
CCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT3008750.5417773495058217No Hit
CCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCC2966970.5342541396471251No Hit
CTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCAC2799400.5040802699481834No Hit
CCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCA2698280.48587186925619225No Hit
ACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCCA2616360.47112075983483226No Hit
TCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT2515260.45291596048791455No Hit
CTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCA2441600.4396522065819407No Hit
TCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCC2416660.43516132927519363No Hit
CACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAA2387080.4298349399113774No Hit
CCCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCA2382000.4289201982626895No Hit
TCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATC2334390.4203471963150461No Hit
CAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAACT2255130.40607506578847147No Hit
ACCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTA2187960.39397994835887246No Hit
TACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAA2066290.37207116560378367No Hit
CAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCAATCAACA2050700.3692639171189326No Hit
CTCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC2004300.36090879654824043No Hit
CCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT1957850.3525446726148643No Hit
CTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAAT1929220.3473893471420428No Hit
CTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCCAC1853040.3336718237567986No Hit
AATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCCTC1733200.3120925640759419No Hit
CCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATC1722420.31015143908128534No Hit
CCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTA1678200.30218886512361276No Hit
CCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTAATA1673210.301290329527756No Hit
CCCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACAC1651750.29742608626381084No Hit
CCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCC1626940.292958617700042No Hit
CCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCC1555300.28005859964649915No Hit
GCCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT1535500.2764932680236607No Hit
GCCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAAT1520440.2737814551832593No Hit
CCTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCAA1497140.2695858881725453No Hit
ACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCA1489200.2681561541783364No Hit
GCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT1488370.268006698357783No Hit
CCCCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATA1374110.24743221395245352No Hit
TTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTC1359020.24471499909444178No Hit
CCAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAAC1326050.23877818174065468No Hit
CACAAACACAATCCCCCACTACCACAAATTATACAATCAAATTTCCCACA1310650.23600514603400255No Hit
CCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCAC1238110.2229430674521488No Hit
GCCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTA1214970.21877631120202348No Hit
CAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCAA1188330.21397931956402258No Hit
CCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCAATCAAC1185000.21337969560927247No Hit
CAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCCT1182300.21289351402434No Hit
ATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACA1179480.21238572436896602No Hit
CCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCA1159060.20870875104884676No Hit
CCCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATT1138890.20507679454214714No Hit
ATTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACT1120970.20184998935622464No Hit
TATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACAA1050860.1892254742008102No Hit
TCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTCC1004890.18094778254919985No Hit
CCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCCCCCACT990970.1784412463779922No Hit
GCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT985210.17740405899680284No Hit
ATCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAA959730.17281594537306927No Hit
CCCCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATAT955850.17211728442879587No Hit
CTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAATT869210.15651625757007237No Hit
TACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAATC866490.15602647464006628No Hit
CCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAA852700.15354334721183685No Hit
CCCCGCTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC836850.1506892812410293No Hit
CCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA834380.15024451512444284No Hit
GCCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACT828040.14910288873611982No Hit
CCTACATTCTCCTACAAATAAACCTTAAAAACTTATTTAAAAATTCTAAC819860.14762993860102797No Hit
CCACACTAAAAATAAACCCCATATAATTAATACACAAACACACACTACCT805670.14507478427132708No Hit
CCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTA768250.1383366676386697No Hit
CTTCACTAACCATAAATCTATTCCAAACTCCAACAAAAAAAACATCCACC759140.13669625495765667No Hit
ATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTA758100.1365089850138308No Hit
ACCACATACAACACCTCATTTAAATATATCTAAAATCTTAAAAACTTAAC739860.1332245583067311No Hit
CTCACACAAAACCCCATTCTCTAAAAACTCACCTCCCTAAAACTCAAAAA717100.12912622761300363No Hit
CAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAATTCACCC691660.12454531667941723No Hit
GCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA686600.12363417637580294No Hit
CTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTAA683630.12309937663237719No Hit
CCCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAA681110.12264560715310682No Hit
CTCACCTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAAC680620.12255737419880426No Hit
CTCCAACAAAAAAAACATCCACCAAACCCCTCCCCAAAAAACAAAATCCA680190.12247994527972242No Hit
CCTCACCTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAA676870.1218821219975091No Hit
TCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA674510.12145716327882734No Hit
CTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCAACACA651120.11724539021528228No Hit
AAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAACTC649900.11702570816579426No Hit
CCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCCCCCACTCCCA648150.11671059047185652No Hit
ACTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT644470.11604794297831884No Hit
CTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAACTCCAA632840.11395376081803546No Hit
ACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTCCAT618980.11145802868204852No Hit
GTCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAA617330.11116091771347864No Hit
CTAAAACTCAAAAAAAACCCTATTAAAACCACCTCTAACCCTAATCTCAA610810.10998687921949343No Hit
CCACATACAACACCTCATTTAAATATATCTAAAATCTTAAAAACTTAACT605100.108958695200988No Hit
CATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCCC602710.10852833446469588No Hit
CCCCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATC596960.10749294775604329No Hit
CCCTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCA586100.1055374173810925No Hit
CTACATTCTCCTACAAATAAACCTTAAAAACTTATTTAAAAATTCTAACA583130.10500261763766673No Hit
CTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCAAC573720.10330818478055007No Hit
GCCCAATCTAACCTCACACAAAACCCCATTCTCTAAAAACTCACCTCCCT566710.10204591333226229No Hit
CTATTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTA565560.10183883599053178No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)