FastQCFastQC Report
Thu 24 Aug 2023
SRR10530033_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10530033_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60379431
Total Bases6 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAA12876312.1325656414350775No Hit
CAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATAT8376551.387318472742812No Hit
CCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCCT6951071.1512314516511426No Hit
CTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAA5825830.9648699736835877No Hit
CCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCC5687210.9419118242435905No Hit
CCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATA5613260.9296642759021694No Hit
AAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATATA4720070.7817347599714877No Hit
CCCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCA4118920.6821727087822341No Hit
CCCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAAT3960900.6560015446319791No Hit
CCTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAA2894900.479451354882758No Hit
CCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCAC2414550.3998961169408834No Hit
CAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCCTA2144330.3551424656519204No Hit
ACTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCA2079490.3444037092698008No Hit
CAACACTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACA2067770.3424626508984492No Hit
CCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC1897130.31420137099337686No Hit
CCCAAAACCACAAATACATTCAAAATATCAATAATCAATATATCCTACAA1750790.289964640441875No Hit
ACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACC1732560.28694540033012234No Hit
TCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAA1725500.28577612796649243No Hit
CAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAAA1616180.2676706244548744No Hit
CACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCC1571170.2602160990884462No Hit
CCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAA1466360.2428575386873056No Hit
CACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACAC1417890.23482997049110982No Hit
ACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACC1259580.2086107767395158No Hit
CACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCC1233910.2043593289244478No Hit
CCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAA1179100.1952817342713945No Hit
CCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC1040930.1723981135231301No Hit
AAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAAAT1028630.17036099594910062No Hit
CAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCC944900.15649369070735364No Hit
ACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT933100.15453938279080504No Hit
TACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAAC927380.15359204030922385No Hit
GCCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACC913130.15123196507101896No Hit
AAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATATAT884330.1464621288001207No Hit
CCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCACA847620.140382243747875No Hit
CACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAAC816690.1352596383361082No Hit
CTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAAT777680.1287988288594505No Hit
CTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAAT763220.12640397356510366No Hit
CATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTAC759050.12571334102171317No Hit
CCCCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAA750920.12436685599107418No Hit
CACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCACAA744070.12323236368358623No Hit
CCCACATTTAAAAAAATCACAAAAATCAACACATCCAAAATACAATAAAT735610.12183122427900984No Hit
GCCTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCA721760.11953739676678968No Hit
CCAAAACCACAAATACATTCAAAATATCAATAATCAATATATCCTACAAT680340.11267744474107416No Hit
CCTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCAA674450.11170194697594947No Hit
CTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCA665820.1102726522878296No Hit
CCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCC665750.1102610589357823No Hit
CCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCA650880.10779829972230114No Hit
AAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATATATC623070.10319242657321497No Hit
ATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACAAC611480.10127289871280834No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)