FastQCFastQC Report
Thu 24 Aug 2023
SRR10530036_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10530036_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52131065
Total Bases5.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACAC7972971.5294086165321963No Hit
CCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAA7303301.4009497024470918No Hit
CCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC7207211.3825173147719119No Hit
CACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCC7024451.3474595234146858No Hit
ACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT4998380.9588102602546102No Hit
CCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC4702170.9019900130565145No Hit
CACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCC4676470.8970601310370314No Hit
CCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAA4544170.871681788967864No Hit
CATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTAC4316650.8280379462802073No Hit
CTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATC4051070.7770932744228417No Hit
CTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAAT3805260.7299409670606192No Hit
CACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAA3324780.6377732739586272No Hit
CTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAAT3308030.634560218556824No Hit
TCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT3091890.5930993353003626No Hit
ACCAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAA3006180.5766580828532852No Hit
CTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATC2968120.5693572536835761No Hit
CCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCC2803050.5376928324790602No Hit
CACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAAC2573100.49358285697788834No Hit
CCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT2552120.48955838519700295No Hit
ACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACT2488180.47729314565125425No Hit
ATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACAAC2396100.4596299730304762No Hit
CTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCA2389720.4584061346147446No Hit
CACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTCCA2329630.44687941825090277No Hit
CCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCA2172490.41673616297691213No Hit
ACCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTA2128630.4083227534292653No Hit
CCCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCA2113960.405508692369895No Hit
TCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCC2081760.3993319530303093No Hit
CTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCAC2058900.39494685174760963No Hit
CCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATC2053150.39384386257982645No Hit
CTCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC2028820.3891767797185805No Hit
TCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATC1997600.3831880280980256No Hit
TCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT1963980.37673889839004826No Hit
AATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCCTC1928410.3699157114860401No Hit
ACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCCA1898000.3640823374699903No Hit
CCCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACAC1875170.3597029909133834No Hit
GCCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT1836390.35226404831744756No Hit
CAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAACT1797390.34478290439683135No Hit
GCCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAAT1790770.34351302817235746No Hit
CTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAAT1735830.33297420645444326No Hit
CCCCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATA1603580.30760545559543045No Hit
CCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCC1573790.3018910125852982No Hit
CCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT1553970.2980890568800004No Hit
TCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCC1548220.2969860677122173No Hit
TACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAA1525340.2925971299454557No Hit
CCTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCAA1465920.28119893579768607No Hit
CTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCCAC1415450.27151756826759627No Hit
CAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCAATCAACA1374780.2637160779278152No Hit
CCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTAATA1373340.2634398510753617No Hit
CAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAATCCT1365680.2619704776796714No Hit
CCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTA1310790.2514412471719118No Hit
GCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT1204130.23098127767004184No Hit
TTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTC1150150.2206266071870966No Hit
CCAAACTTAATACAAACACCCAATCAACATAACACACTACAACCCAAAAC1144630.21956773758602474No Hit
GCCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTA1131180.2169877020544276No Hit
CCCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATT1062740.2038592535947616No Hit
ACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCA1055880.2025433395615455No Hit
CCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA1030100.19759811160581509No Hit
ATTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACT1028900.19736792256210384No Hit
CCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCAC1020930.19583908366345482No Hit
CCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCC1016890.1950641138829602No Hit
CCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCAATCAAC1002900.19238049328169296No Hit
CCCCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATAT971410.1863399491263031No Hit
CAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCAA970450.18615579789133407No Hit
CCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCA951140.18245167252961358No Hit
CCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCCCCCACT911260.17480172331027574No Hit
ATCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAA899880.17261876387908054No Hit
CCCCGCTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC871320.16714026463875234No Hit
ATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACA856450.16428783873876354No Hit
CTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAATT818610.15702921089373487No Hit
GCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA803390.1541096465226636No Hit
CTCCAACAAAAAAAACATCCACCAAACCCCTCCCCAAAAAACAAAATCCA800630.15358021172212766No Hit
TATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACTACAA760750.14593026250278984No Hit
CTTCACTAACCATAAATCTATTCCAAACTCCAACAAAAAAAACATCCACC759110.14561567080971777No Hit
GCTCACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAAT755640.14495004082498603No Hit
TCCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTA752230.14429592029243984No Hit
CCTCACCTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAA749880.14384513341517194No Hit
CCTACTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAA747030.14329843443635767No Hit
CTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATCAACACA707350.13568685005763836No Hit
CACAAACACAATCCCCCACTACCACAAATTATACAATCAAATTTCCCACA706620.1355468183893807No Hit
CTCACCTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAAC677990.13005489145483598No Hit
CCTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTA676200.12971152613130002No Hit
GCCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACACT664440.1274556735029296No Hit
CCTACATTCTCCTACAAATAAACCTTAAAAACTTATTTAAAAATTCTAAC653800.125414663982023No Hit
CTCAACCATTAAACTCACTTCACTAACCATAAATCTATTCCAAACTCCAA651990.1250674621744252No Hit
ACCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAAT641320.1230206979274258No Hit
CCCTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCA639290.12263129479514757No Hit
CCACACTAAAAATAAACCCCATATAATTAATACACAAACACACACTACCT612820.11755370813928316No Hit
ACTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAAT606990.1164353730352526No Hit
CCCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAA605030.11605939759719085No Hit
CCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAA590600.11329137434656283No Hit
CTCCTTAAACAACCTAATAATCCCCCACTCCCAAAAAATCACCATATTAA589910.11315901564642886No Hit
ACCACATACAACACCTCATTTAAATATATCTAAAATCTTAAAAACTTAAC574300.11016463983615143No Hit
CTCACTTCACTAACCATAAATCTATTCCAAACTCCAACAAAAAAAACATC551420.10577570206938991No Hit
ATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTA549260.10536136179070962No Hit
CCTAAACCAATTCACCCCTCCTTAAACAACCTAATAATCCCCCACTCCCA548830.10527887738337977No Hit
CTATTCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTA546410.10481466281189536No Hit
CTAAAACTCAAAAAAAACCCTATTAAAACCACCTCTAACCCTAATCTCAA545580.1046554487233284No Hit
CCCGCTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAA544290.1044079955013388No Hit
TCACAAACACAATCCCACTACTAATCAACACAAAAATTTTAACCTACTCC544040.1043600394505656No Hit
GCCCAATCTAACCTCACACAAAACCCCATTCTCTAAAAACTCACCTCCCT542920.10414519634310175No Hit
CAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAACCAATTCACCC542140.10399557346468943No Hit
ATCCCCTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCA538820.10335871711042159No Hit
CTCACACAAAACCCCATTCTCTAAAAACTCACCTCCCTAAAACTCAAAAA538300.10325896852481337No Hit
CTTAACCAAAAACCAATCCTCCTCTATCAAAAATAATCATCCTCTTCAAC535910.10280050867942177No Hit
CTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACCCAATC532540.10215406111499928No Hit
CCCCATTCTCTAAAAACTCACCTCCCTAAAACTCAAAAAAAACCCTATTA532440.10213487869469001No Hit
GTCTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAA526120.10092254973114399No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)