FastQCFastQC Report
Thu 24 Aug 2023
SRR10530037_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10530037_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42047645
Total Bases4.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC31

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAA14892653.541851154803081No Hit
CAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATAT6735121.6017829298168778No Hit
CCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCC5362791.2754079330721138No Hit
CCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATA5239761.2461482682323826No Hit
CCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCCT4990091.1867703886864531No Hit
CTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAA4940331.1749361944051802No Hit
CCCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAAT4162310.9899032395274456No Hit
CCTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAA2646760.6294668821523774No Hit
AAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATATA2596030.6174019971867627No Hit
ACTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCA2549720.6063883007003127No Hit
CCCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCA2266270.5389766775285513No Hit
CAACACTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACA1810940.4306876163932606No Hit
CCCAAAACCACAAATACATTCAAAATATCAATAATCAATATATCCTACAA1806550.42964356267752923No Hit
ACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACC1495430.35565130936583966No Hit
CAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACCCTA1240720.2950747895631254No Hit
TCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAA1230470.29263707872343386No Hit
CCCACTACCACAAATTATACAATCAAATTTCCCACATTTAAAAAAATCAC1228960.2922779622972939No Hit
CAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAAA1195780.2843869139401267No Hit
CCCAAACTAAAATACAATAACTATTCACAAACACAATCCCACTACTAATC1139680.27104490631996153No Hit
CACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATCCC1006980.23948546940024823No Hit
CACCATATTAATACCAAACTTAATACAAACACCCAATCAACATAACACAC971960.2311568222191754No Hit
CCCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAA954790.22707335928088243No Hit
CCCCAAAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAA853820.20306012381906285No Hit
ACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACC797550.18967768587277598No Hit
AAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTCAAAAT734990.17479932585998575No Hit
CACTATATTACTCAAACTAAAATACAATAACTATTCACAAACACAATCCC734760.17474462600699756No Hit
GCCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCCAACC700590.1666181304565333No Hit
CCACTACTAATCAACACAAAAATTTTAACCTACTCCATTTCCAACCTAAA685840.16311020510185528No Hit
CACTCAAACAAACATAACCCCAAAAAAAACCCAAAACCACAAATACATTC631860.15027238743097265No Hit
CAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAACCC623260.14822708858010955No Hit
TACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCAAAC605720.1440556302261399No Hit
CCAAAACCACAAATACATTCAAAATATCAATAATCAATATATCCTACAAT603830.14360614012984557No Hit
CCCCACTCCCAAAAAATCACCATATTAATACCAAACTTAATACAAACACC581810.1383692237698449No Hit
GCCTACAACACCCAATATTCCCAAACAATCTCCCATCCAAATACTAACCA576020.13699221442722892No Hit
CTCAAACAAACATAACCCCAAAAAAAAACCCAAAACCACAAATACATTCA491800.11696255521563693No Hit
ACCCAATCAACATAACACACTACAACCCAAAACTCCTAAACTCAAACAAT490330.11661295180740801No Hit
CTCCATTTCCAACCTAAACCAATTCACCCCTCCTTAAACAACCTAATAAT489370.11638463937754422No Hit
CTCACTATATTACCCAAACTAAAATACAATAACTATTCACAAACACAATC484080.11512654275881563No Hit
CTACAAAATACCTCACCTCAACCATTAAACTCACTTCACTAACCATAAAT483630.11501952130731696No Hit
AAAAAAACCCAAAACCACAAATACATTCAAAATATCAATAATCAATATAT473130.11252235410568179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)