FastQCFastQC Report
Tue 18 Jul 2023
SRR10669482_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10669482_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44608057
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGAAACAGTTTTATCCGGTAAAGC14190553.1811629903539624No Hit
ACCGAAACAGTTTTATCCGGTAAAGCG10825452.4267925410873645No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC9060292.031088240404643No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT7895321.7699313825751253No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT5986241.3419638519561612No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT5195011.164590064974137No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATG4909081.1004917788730408No Hit
CCGAAACAGTTTTATCCGGTAAAGC3801500.8522003099126241No Hit
TTGGAGCCTCCTTTACACAAGCGCTTCA3789890.8495976410718808No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT3202010.717809789384012No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGATT2948910.6610711603063096No Hit
ACCGAAGCAGTTTTATCCGGTAAAGC2901410.6504228597089535No Hit
CCGAAACAGTTTTATCCGGTAAAGCG2766290.6201323675675898No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGAT2193420.4917093788684856No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGA2062960.46246354105940995No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT1904050.42683993162939154No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAA1816670.40725154202524444No Hit
CCGAAGCAGTTTTATCCGGTAAAGC1792070.401736843189561No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1778380.3986678908700282No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAAT1774210.39773308216495507No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1728270.387434494176691No Hit
ACCGAAACAGTTTTATCCGGTAAAG1667880.37389658105933643No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1600570.35880737867600915No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGATT1600340.35875581848364296No Hit
ACCGAAGCAGTTTTATCCGGTAAAGCG1598150.3582648757824175No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAG1519320.34059318028579455No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC1368070.3066867494363182No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG1313710.29450061005795436No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG1276740.2862128695719699No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCG1273130.28540359872657084No Hit
ATTGATCATCGACACTTCGAACGCA1269220.28452707545634637No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTA1219440.2733676564303171No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCC1202060.2694714992854318No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCC1137750.25505482115035855No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGA1126130.25244991056212107No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCCG1076140.241243414838714No Hit
TTTGATCATCGACACTTCGAACGCA1023630.2294719987467735No Hit
ACCGAAACAGTTTTATCCGGTAAA1020920.22886448517585065No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGAT1015900.22773912793377216No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT985400.22090179807652235No Hit
CCGAAGCAGTTTTATCCGGTAAAGCG978660.21939086026544485No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGAT962340.21573232835494272No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCC940380.21080945085772285No Hit
GGGAGCCTCCTTTACACAAGCGCTTC922800.20686845876295396No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCG900740.20192316379079234No Hit
ACCGGCTCCGGGACGGCTGGGAAGGCCC895450.20073727936637098No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGA888960.199282385242648No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTAC872980.19570007274694792No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC861860.19320724953341947No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAG859270.1926266369324268No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT858390.19242936315293893No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA847370.18995895741435231No Hit
ATGTTAGGGATAACAGGGTAATGCGA823260.18455410420588372No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCGC822250.18432768770897148No Hit
CCGAAACAGTTTTATCCGGTAAAG811660.1819536771126346No Hit
CGTTTACTTTGAAAAAATTAGAGT809920.18156361304864724No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGC777030.1741905055402884No Hit
GGGAGCCTCCTTTACACAAGCGCTTCA775780.17391028710351586No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCC745510.16712451743863221No Hit
CCGAAACAGTTTTATCCGGTAAAGCGAATG719570.16130942443872862No Hit
AGCTTGGTGATAGCTGGTTACCCAATAAAG716290.16057413126063752No Hit
AGACGGTGTGAGGCCGGTAGCGGCCCCCG714980.1602804623388999No Hit
ACCGAAACAGTTTTATCCGGT705160.1580790662996149No Hit
TACCGAAACAGTTTTATCCGGTAAAGC688830.15441829264161855No Hit
TTCCCGGGGCTACGCCTGTCTGAGCGTCGCT671440.15051989374923908No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCC664440.1489506705033129No Hit
TCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGC648420.14535939101763612No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC630800.14140943193289052No Hit
TGGAGCCTCCTTTACACAAGCGCTTCA623520.13977743975712728No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC610100.13676901461993737No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGC602340.1350294185644535No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC592870.1329064836874648No Hit
ACCGAAACAGTTTTATCCGGTAAAGCT588430.13191114780004876No Hit
GCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCC582160.13050557212119776No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT578060.12958645564858384No Hit
TGGAGCCTCCTTTACACAAGCGCTTC548740.12301365199564734No Hit
TCAACTTTAAATTTACCTAAAGGAAT546890.12259892870922398No Hit
AGTTCAACTTTAAATTTACCTAAAGGAAT524710.11762673276713219No Hit
TTGCAGTTAAAAAGCTCGTAGTTGGATCTTG515450.11555087458752127No Hit
TTGTGCTTTAAGGAAAGATTAAAAGGAAT511640.11469676879223857No Hit
AGACGGTGTGAGGCCGGTAGCGGCCCCC495930.1111749834788814No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGG474090.10627900695159172No Hit
TCGTTTACTTTGAAAAAATTAGAGT473580.10616467782938854No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT456620.10236267407925882No Hit
TACCGAAACAGTTTTATCCGGTAAAGCG449150.10068808870110618No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)