FastQCFastQC Report
Tue 18 Jul 2023
SRR10669483_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10669483_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24436878
Total Bases705.4 Mbp
Sequences flagged as poor quality0
Sequence length18-37
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATT6134952.5105293728601503No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC4842231.9815256269642954No Hit
ACCGAAACAGTTTTATCCGGTAAAGCG4757341.946787146868761No Hit
ACCGAAACAGTTTTATCCGGTAAAGC3718741.5217737715922632No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3467961.4191501876794572No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT3136821.2836418792940734No Hit
CCGAAACAGTTTTATCCGGTAAAGCG2583551.0572340705715353No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCC2359490.9655447803111348No Hit
TTGGAGCCTCCTTTACACAAGCGCTTCA2226400.9110820130132826No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGA2109100.8630807912532854No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT1846080.7554483842003057No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGATT1745470.7142770037972936No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC1721650.7045294411176419No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1480220.6057320415480243No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATG1463220.5987753427422275No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGA1375920.5630506482865774No Hit
CCGAAACAGTTTTATCCGGTAAAGC1322340.5411247705210134No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCC1274050.5213636537367825No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1184600.4847591414909875No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCC1050240.4297766678705848No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAG990850.4054732359837455No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAA921370.37704079874687757No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCCG917200.37533436145157334No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAAT897890.3674323700433419No Hit
CCGAAGCAGTTTTATCCGGTAAAGCG870430.35619525538409613No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGAT799200.3270466873878079No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT799120.32701394998166294No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT776800.3178802136672287No Hit
ACCGAAACAGTTTTATCCGGTAAAG766680.3137389317898956No Hit
ACCGAAACAGTTTTATCCGGTAAA716900.2933680808162155No Hit
ACCGGCTCCGGGACGGCTGGGAAGGCCC703220.2877699843654333No Hit
AGCTCGCCGAATCCCGGGGCCGAGGG693190.28366553207001316No Hit
ACCGAAGCAGTTTTATCCGGTAAAGC668320.27348829093470944No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG619750.2536125932289714No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTA606720.24828048820311663No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGAT595090.24352128778479804No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGATT582050.23818509058317516No Hit
ATTGATCATCGACACTTCGAACGCA575640.235562005915813No Hit
GCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCC556770.22784007024137862No Hit
AGTTCAACTTTAAATTTACCTAAAGGAAT549460.22484868975488603No Hit
ACCGAAGCAGTTTTATCCGGTAAAGCG546070.22346144216949482No Hit
CCGAAGCAGTTTTATCCGGTAAAGC540220.2210675193451471No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT535650.21919739501911825No Hit
CCGAAACAGTTTTATCCGGTAAAGCGA523140.2140780831332055No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCCG519830.2127235729539592No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCC517000.21156548721158241No Hit
AGCTTGGTGATAGCTGGTTACCCAATAAAG499160.204265045641264No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC491860.20127775733053951No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCC474410.1941369106151776No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAG472700.19343714855882982No Hit
TTTGATCATCGACACTTCGAACGCA428370.17529653337877285No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTAC414500.16962068558839635No Hit
TCAACTTTAAATTTACCTAAAGGAAT410430.16795517005077326No Hit
TTCCCGGGGCTACGCCTGTCTGAGCGTCGCT401360.1642435666290923No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCC398220.162958623437904No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGA394250.16133402965796204No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG384430.15731551305367242No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT382600.15656664488810723No Hit
CCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG380660.1557727627890928No Hit
CCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG378300.15480700930781746No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA378290.15480291713204936No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGC369510.15120998680764375No Hit
AGGGAGTCGGGTTCAGATCCCCGAATCCGGAG356370.1458328678483397No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCG353630.144711611687876No Hit
GCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCC351820.14397092787384708No Hit
CCCCGGGGCTACGCCTGTCTGAGCGTCGCT350320.1433571015086297No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC335740.137390709238717No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCC334040.13669503935813732No Hit
AAGGGAGTCGGGTTCAGATCCCCGAATCCGGAG332340.13599936947755767No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC324440.13276655062074622No Hit
GCTCGCCGAATCCCGGGGCCGAGGGAGCCCG317700.13000842415303626No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC315880.12926364816323918No Hit
ACGGTGTGAGGCCGGTAGCGGCCCCC314590.12873575748915228No Hit
GCTCGCCGAATCCCGGGGCCGAGGGAGCCC311650.12753265781332623No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGC308770.1263541111921089No Hit
TTTCAACTTTAAATTTACCTAAAGGAAT307750.1259367092637611No Hit
TTGCAGTTAAAAAGCTCGTAGTTGGATCTTG306320.12535152812892056No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAA300000.12276527304347143No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC299330.12249109726700767No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT298960.1223396867635874No Hit
GGGAGCCTCCTTTACACAAGCGCTTC296620.12138211763384832No Hit
TTGTGCTTTAAGGAAAGATTAAAAGGAAT293930.1202813223522252No Hit
AGCTTGGTGATAGCTGGTTACCCAATAAAGAATT292810.11982299866619622No Hit
CCGGGGCTACGCCTGTCTGAGCGTCGCT290250.11877540166955862No Hit
ATGTTAGGGATAACAGGGTAATGCGA290140.11873038773610933No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCG286680.1173144949203413No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG284000.11621779181448628No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCGC283290.11592724733495006No Hit
CCGAAACAGTTTTATCCGGTAAAG278010.11376657852938496No Hit
GGGAGCCTCCTTTACACAAGCGCTTCA277170.11342283576486324No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGT277000.11335326877680528No Hit
TGGAGCCTCCTTTACACAAGCGCTTCA274240.11222382826480534No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGAT270020.11049693009066051No Hit
CCGAAACAGTTTTATCCGGTAAAGCGAATG267990.10966621840973302No Hit
AGCTTGGTGATAGCTGGTTACCCAATAAAGAAT262510.10742370608880561No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATG260020.1064047543225448No Hit
TTGGACGGTGTGAGGCCGGTAGCGGCCCCCG259660.10625743599489262No Hit
TCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGC254410.10410904371663189No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTT253210.10361798262445801No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)