FastQCFastQC Report
Tue 18 Jul 2023
SRR10669484_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10669484_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36500855
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length18-37
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC35103049.617045956868681No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT10454582.864201400213776No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC6852381.877320407974005No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6195261.6972917483713736No Hit
ACCGAAACAGTTTTATCCGGTAAAGCG3785301.0370442007454346No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT3757241.0293567095894054No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCC3100960.8495581815823219No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAG2912840.7980196628270761No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG2742840.7514454113472137No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2605500.7138188954751882No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2521210.6907262857267316No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT2500660.6850962806213717No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGA2434600.6669980744286674No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2304790.6314345239310148No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCC1935090.5301492252715724No Hit
ACCGAAACAGTTTTATCCGGTAAAGC1878040.5145194544073008No Hit
CCGAAACAGTTTTATCCGGTAAAGCG1871700.5127825087932871No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCGC1774350.4861119006664364No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC1749260.47923808908037907No Hit
TCGCCGAGGGCGCACCACCGGCCCGTCTCG1746010.47834769897855817No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1685940.46189055023505615No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGCCCG1647420.4513373727820897No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG1645560.4508277956776629No Hit
AGCTCGCCGAATCCCGGGGCCGAGGGAGC1592690.4363432034674256No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC1533260.420061393082436No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1508310.4132259367623033No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTAC1271850.3484438926156661No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTA1265180.34661653816054444No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATG1257410.3444878209017296No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1221990.3347839386228076No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGATT1216170.33318945542508527No Hit
TTGGAGCCTCCTTTACACAAGCGCTTCA1159900.3177733781852507No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGA1120310.30692705691414623No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGG1082560.296584833423765No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAT1052640.2883877651633092No Hit
ACCGGCTCCGGGACGGCTGGGAAGGCCC1005720.27553327175486714No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGC988300.2707607808091071No Hit
TTGGCGCGGCGCGGGAAATGTGGCGTACG877810.24049025700904814No Hit
CCGAAACAGTTTTATCCGGTAAAGC865610.23714786954990505No Hit
GCCGCGACCGGCTCCGGGACGGCTGGGAAGGCCC821370.2250276055177338No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCC776810.21281967230630622No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT767770.21034301799231825No Hit
AGCTCGCCGAATCCCGGGGCCGAGGG752820.2062472235239421No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT647490.17739036523938959No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGC594880.16297700423729802No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAAT572640.15688399627899127No Hit
AAATTCTAGAGCTAATACATGC571780.1566483853597402No Hit
CCGAAGCAGTTTTATCCGGTAAAGCG562700.1541607723983452No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGA513440.14066519811659206No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCC500260.13705432379597682No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGAT478150.13099693144174293No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCA475000.1301339379584396No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGCC455490.12478885768566243No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC453290.12418613207827596No Hit
ATTGATCATCGACACTTCGAACGCA449350.12310670530868387No Hit
CCGCGACCGGCTCCGGGACGGCTGGGAAGGCCC443180.12141633394615002No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGC434320.11898899354549365No Hit
TCGCCGCGACCGGCTCCGGGACGGCTGGGAAGGC430460.11793148407071562No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT429440.11765203856183643No Hit
TTCCCGGGGCTACGCCTGTCTGAGCGTCGCT416690.11415896970084674No Hit
TAGCTCGCCGAATCCCGGGGCCGAGGGAG402580.11029330682801813No Hit
TAGCTCGCCGAATCCCGGGGCCGAGGGAGCCC396260.10856184053770795No Hit
CCGAAGCAGTTTTATCCGGTAAAGC392430.10751255004848516No Hit
ACCGAAGCAGTTTTATCCGGTAAAGCG385330.10556739013373795No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT381900.10462768611858544No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAATGATT376450.10313457040937808No Hit
GCTCGCCGAATCCCGGGGCCGAGGGAGCCC370730.1015674838301733No Hit
ACCGAAACAGTTTTATCCGGTAAAGCGAA367300.10062777981502077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)