FastQCFastQC Report
Sat 30 Sept 2023
SRR10759502.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10759502.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65442982
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length10-40
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCCCGAGTTGTAATTTG8677811.3260107859999413No Hit
TTGCCCGAGTTGTAATTT6804261.0397234038021068No Hit
AATACTGAATATCTAAATATTATTATTACTT4044460.6180127916542678No Hit
TTTTAAAACCTAAGGGTAAACCTTTA3758270.5742815937085507No Hit
ACGTTCTAGCATTCAAGGTC2993510.45742261561369557No Hit
AGAGGTGCACAATCGACCGATCCTG2664790.40719263067810696No Hit
ATAAATCATTTGTATACGACTTAGAT2553720.3902206045561922No Hit
ATGTACACGGAGTCGAGCACCCGCAACGCGACTG2542730.38854128010242567No Hit
TCACGTTCTAGCATTCAAGGTC2522260.3854133664019161No Hit
ATATAAAGAATGGTACAGCAATTAATATA2349320.35898730898295556No Hit
TGTGCCCGAGTTGTAATTT2251920.3441041241060806No Hit
AATACTGAATATCTAAATATTATTATTACT2243640.34283890058677335No Hit
TTTTTAAAACCTAAGGGTAAACCTTTA2162010.33036544697795095No Hit
TGTTAATAGATAATATACGGATCTTAATA2118650.32373983202660295No Hit
TGTGCCCGAGTTGTAATTTG2063280.31527903175316796No Hit
AAGAGGTGCACAATCGACCGATCCTG1946470.29742990623501847No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAAT1926110.29431880105952385No Hit
TTGTTAATAGATAATATACGGATCTTAATA1472250.22496682684783526No Hit
TTTTAAAACCTAAGGGTAAACCTTTAT1447590.22119866114902895No Hit
CCTGATTCAAGCTCAGGTA1429410.2184206703783761No Hit
TCAGATTTAGGCTCTGATA1379470.21078960002158825No Hit
ATTTTAAAACCTAAGGGTAAACCTTTA1226570.1874257502508061No Hit
GTGCCCGAGTTGTAATTT951430.1453830450452273No Hit
TTCACGTTCTAGCATTCAAGGTC948580.1449475514425672No Hit
TATATAAAGAATGGTACAGCAATTAATATA939690.14358911701181343No Hit
ATATAAAGAATGGTACAGCAATTAATATAT845150.1291429537853272No Hit
GTGCCCGAGTTGTAATTTG831300.127026607681172No Hit
AGAGGTGCACAATCGACCGATCCTGA800410.12230646824742797No Hit
GACTCCATGGCCAAGTTGG787210.12028944524563381No Hit
TTAAGGCAAAAGATTGGAAATCTTTTG719480.10993997797960979No Hit
AAAAACAATAATAACTTTCTCCT711090.10865794593528762No Hit
TTAAGGCTTCAGATTTAGGCTCTGATA708050.10819341942578349No Hit
TGCAAGAGTTCGAATCTCTTAGCAACCACCA693580.1059823343624531No Hit
AAAAATATGTACAGTAAAATTGTAAG661510.10108188529673053No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)