FastQCFastQC Report
Sat 30 Sept 2023
SRR10759503.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10759503.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90268862
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length10-40
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCCCGAGTTGTAATTT16387901.8154543700794632No Hit
TTGCCCGAGTTGTAATTTG12550801.3903797745893816No Hit
TTTTAAAACCTAAGGGTAAACCTTTA6328910.7011177342636711No Hit
ATGTACACGGAGTCGAGCACCCGCAACGCGACTG5842030.6471810844364029No Hit
ATAAATCATTTGTATACGACTTAGAT3861670.42779646430017026No Hit
ACGTTCTAGCATTCAAGGTC3681590.4078471710433217No Hit
TTTTTAAAACCTAAGGGTAAACCTTTA3532070.39128331982295295No Hit
AGAGGTGCACAATCGACCGATCCTG3266990.36191771200128786No Hit
TGTGCCCGAGTTGTAATTT2822860.31271691449926553No Hit
TCACGTTCTAGCATTCAAGGTC2742860.3038545007912031No Hit
TGCAAGAGTTCGAATCTCTTAGCAACCACCA2530240.2803004207586No Hit
ATATAAAGAATGGTACAGCAATTAATATA2529670.2802372760609301No Hit
TGTTAATAGATAATATACGGATCTTAATA2353690.26074218150661965No Hit
AATACTGAATATCTAAATATTATTATTACTT2301900.2550048764323627No Hit
TTTGCTCGAATATATTAGCATGGAATAATAGAAT2065180.22878099427020585No Hit
TGTGCCCGAGTTGTAATTTG1824720.202142794267197No Hit
AATACTGAATATCTAAATATTATTATTACT1659930.18388732983030184No Hit
GACTCCATGGCCAAGTTGG1604950.1777966360094359No Hit
TTAAGGCAAAAGATTGGAAATCTTTTG1541920.17081416180919617No Hit
GTGCCCGAGTTGTAATTT1473750.16326227752821343No Hit
AAGAGGTGCACAATCGACCGATCCTG1128640.12503093259334544No Hit
CTGCCCGAGTTGTAATTT1113270.12332824135968391No Hit
AAAAACAATAATAACTTTCTCCT1091630.12093095845165303No Hit
TTCACGTTCTAGCATTCAAGGTC984420.10905421628113578No Hit
ATTTTAAAACCTAAGGGTAAACCTTTA981170.10869418072424575No Hit
TTGTTAATAGATAATATACGGATCTTAATA965600.10696933345631408No Hit
TGCCCGAGTTGTAATTT944350.10461525481511001No Hit
TATATAAAGAATGGTACAGCAATTAATATA927730.10277408836726003No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)