FastQCFastQC Report
Tue 11 Jul 2023
SRR10868222.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10868222.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17978547
Total Bases916.9 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCC337330.18762917826451717No Hit
CGCGCGGCGCCTCGCCTCGGCCGGCGCCTAGCAGCCGACTTAGAACTGGT300780.16729939299321575No Hit
AACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTT257910.14345430695817632No Hit
AACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCGAGCGGTC194910.10841254301585106No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)