FastQCFastQC Report
Thu 24 Aug 2023
SRR10868295_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10868295_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12216077
Total Bases623 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGCCCTGGCGGAGCGCTGAGAAGACGGTCGAACTTGACTATCTAGAGG161240.13198999973559433No Hit
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC136760.11195083331580179No Hit
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA133870.10958509839124296No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC129860.10630253885924262No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)