FastQCFastQC Report
Thu 24 Aug 2023
SRR10887267.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10887267.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36511401
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length39
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGAATTCTCGGGTGCCAAGGAGATCGGAAGAGCGGTTC2922760.8005061213619274RNA PCR Primer, Index 1 (95% over 22bp)
ATGTACACGGAGTCGACCCAACGCGATGGAATTCTCGGG858690.23518407305159286No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGATGGAA631180.17287202975311738No Hit
CGGGGGCCCGAGGTGGGATCCCGAGGCCTCTTGGAATTC501820.13744200065070086No Hit
ACCTCACCCCGAGTGTTACAGCCCTCCGGCTGGAATTCT366350.10033852165793364No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)