FastQCFastQC Report
Thu 24 Aug 2023
SRR10919494.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10919494.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83860652
Total Bases2.6 Gbp
Sequences flagged as poor quality0
Sequence length1-60
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG10084501.2025305980211076No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT6376560.7603756765449426No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATT4897860.5840474505254264No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT4697480.5601530500859927No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGATT4635280.5527359839749397No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC4162420.49634958716991606No Hit
AGAGTGGCGCAGCGGAAGCGTGCTGGGC3817410.45520871934074636No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT3512350.41883170667454384No Hit
ACCTCTAGCATTACAAGTATTAGAGGC3390730.40432907676415397No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGAC3354720.4000350486185106No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC3339490.39821894063022545No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGC3262740.38906685342727837No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC3151240.37577098732788294No Hit
TAACCTAGACTTACAAGTCAAAGTAAAAT3047060.3633479978190487No Hit
AAGTTCAATTTTAAACTTGCTAAAAAAAC2911230.34715089026496004No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT2584240.30815882519015No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCG2578100.3074266582139142No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCG2523170.30087650642162905No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCC2453190.29253171081951523No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC2274000.27116412116614597No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG2264130.26998716871411876No Hit
TGCGCCGCTGGTGTAGTGGTATCATGCAAGATT2249830.2682819589811918No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG2207570.2632426468613671No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG2034150.24256310337296208No Hit
TTTCCATAGTGTAGCGGTTATCACGTCTGCT1969410.2348431538548019No Hit
AAAAGCATCTGGCCTACACCCAGAAGATT1918820.2288105272541883No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1869710.22295438389866085No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC1798560.21447007113658023No Hit
GGAGGCGTGGGTTCGTATCCCACTTCTGACAC1740090.20749779050131875No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGC1737780.20722233354446137No Hit
AGAGTTGCGCAGCGGAAGCGTGCTGGGC1644290.19607407774506688No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1583840.18886569114678478No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGAT1558560.185851166528016No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGATT1552240.18509753537332385No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG1487970.17743363121002206No Hit
TCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGGG1449890.17289276501212988No Hit
AACCTAGACTTACAAGTCAAAGTAAAAT1344560.16033264325204627No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCC1342670.1601072693782538No Hit
TGCCGCTGGTGTAGTGGTATCATGCAAGATT1336530.15937510240201805No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC1328950.1584712219981309No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGCAC1321500.15758284350090673No Hit
TATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG1315070.15681609534826893No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAA1298850.15488193437847347No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1289820.15380514809257625No Hit
GGGGATGTAGCTCAGTGGTAGAGCATGCTT1262560.15055451751078683No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1255840.14975318818174702No Hit
GCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1231110.14680424855270624No Hit
TTCCCGGGGAGCCCGGCGGGTGCCGGCGCGGG1217910.14523020879923518No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGAT1192680.14222164645225988No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC1191810.14211790292305382No Hit
GCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC1169890.13950404296880498No Hit
TGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1169500.13945753724881604No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGAC1163240.138711060820276No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1152650.1374482516544231No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1151640.1373278137641954No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGT1131930.13497748622321706No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGCC1114970.13295508363087852No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCG1101990.13140727787329867No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1097890.1309183715862357No Hit
CCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1094790.13054871073504176No Hit
CCGCCGCTGGTGTAGTGGTATCATGCAAGATT1086390.129547049073742No Hit
GCGAAAGGTCCCCGGTTCGTAACCGGGCGGAAA1080660.12886377272621252No Hit
CGGGAGGCCCGGGTTCGTTTCCCGGCCAATGCAC1074920.12817930392432436No Hit
GCATTGGTGGTTCAGTGG1070790.12768682027418532No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCG1061320.12655756599650572No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGAT1053210.12559048551160798No Hit
TCCGCTGGTGTAGTGGTATCATGCAAGATT1051090.1253376851875657No Hit
GCGGGAGGCCCGGGTTCGTTTCCCGGCCAATGCAC1022260.1218998392714619No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGC1002170.11950419846485334No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC982660.1171777200110488No Hit
CGTGATCGTATAGTGGTTAGTACTCTGCGT977990.1166208438255405No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATTT973690.11610808845130371No Hit
TGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC956740.11408687831332388No Hit
AATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG947250.1129552391269269No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCG935820.11159226379494401No Hit
CGGGAGGCCCGGGTTCGTTTCCCGGCCAATGC934600.11144678436318382No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGCAC932860.11123929730477172No Hit
GCCGCTGGTGTAGTGGTATCATGCAAGATT909230.10842152765518684No Hit
ATTCTTGCGACCCGGGTTCGGTTCCCGGGCGGCG906090.10804709698655814No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCG904910.10790638737223268No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGA902540.10762377568922313No Hit
GGAGGCGTGGGTTCGAATCCCACTTCTGACAC899680.10728273374263773No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTC897740.10705139759705183No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT868100.10351696287789415No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC863150.10292669797034251No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC845940.10087448401903672No Hit
GGAGGCGTGGGTTCGGATCCCACTTCTGACAC842370.10044877781298432No Hit
AGAGCCACCTTACAAATAAGCGCTCTC839360.10008984905101859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)