FastQCFastQC Report
Tue 18 Jul 2023
SRR10919495.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10919495.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33143940
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length1-60
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAAAGCATCTGGCCTACACCCAGAAGATT3497221.0551612149913376No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG3045210.9187833431993904No Hit
AAGTTCAATTTTAAACTTGCTAAAAAAAC2752720.830534933384504No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC2508290.7567869118758965No Hit
ACCTCACCCCGAGTGTTACAGCCCTCCGGC1824540.5504897727910442No Hit
AAAAGCATCTGGCCTACACCCAGAAGATT1607110.4848880368477616No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1600960.4830324940245487No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC1352790.40815606110800345No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT1343040.4052143468760805No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGATT1230920.37138614178036766No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGC1116500.33686399384020127No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGAT1083700.3269677654497323No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC1050330.31689955991955093No Hit
ACCTCACCCCGAGTGTTACAGCCCTCCGGCC950750.28685485189751125No Hit
TCGCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC870340.26259400662685245No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAA860180.25952858954004865No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC840600.253621023933787No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGAC814980.2458911040751341No Hit
AAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG763200.23026833864652183No Hit
GCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCT721290.2176234931634561No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT676420.20408557341100664No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGATT638290.1925812079070865No Hit
TGCCGGGCGCGGTGGCGCACGCCTGTAGTCCCAGCT617550.18632365373579604No Hit
AAAGTTCAATTTTAAACTTGCTAAAAAAAC604970.18252808809091495No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC601000.18133028239853197No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC587750.17733256818591875No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC584440.17633389391846593No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCC576540.17395035110490786No Hit
ACCTCACCCCGAGTGTTACAGCCCTCCGGCCGC567220.17113837401346974No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC563440.16999789403432422No Hit
TCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGGG554120.1671859169428861No Hit
ACCCCGAGTGTTACAGCCCTCCGGCCGC540810.163170099873461No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC534460.16125421419420866No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCC533940.1610973227685061No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC521840.15744657997811967No Hit
GCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC521200.15725348283879345No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT491690.14834989443017335No Hit
AAAACGATGCCGACTGGCGATGCGGCGGCGTT487000.14693485445604837No Hit
CTCACCCCGAGTGTTACAGCCCTCCGGC476710.14383021451281894No Hit
AGAGCCACCTTACAAATAAGCGCTCTC467330.14100013456456897No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC464860.14025490029248183No Hit
GGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACC462390.1395096660203947No Hit
TCGGGAGACCGGGGTTCGATTCCCCGACGGGGAG456590.13775972319525076No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGAC455340.13738258034500422No Hit
TGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCC448790.13540635180971242No Hit
AAAAAGTAAGTTTAGATTATAGCCAAAAGAGG442690.13356589470050934No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATTT441770.1332883175627279No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCG438880.13241636329295794No Hit
TGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT436930.13182802044657335No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGCA423490.12777298052072264No Hit
ACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAAC417580.12598984912475703No Hit
ACCTCTAGCATTACAAGTATTAGAGGCACT417010.12581787198504463No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT411890.12427309487043484No Hit
CCCTCCGCGCGCCGGGTTTCGCCCCCGCGGCGTC406980.12279167775466646No Hit
TAAGTTCAATTTTAAACTTGCTAAAAAAAC406320.1225925463297363No Hit
TCGGGAAACTCGACTGCATAATTTGTGGTAG403350.12169645491755055No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGA400960.12097535778787917No Hit
CCGCGGCCCGGGTTCGATTCCCGGTCAGGGAAC396170.11953014638573446No Hit
TATTAAAGCATCTGGCCTACACCCAGAAGATT380300.1147419407590045No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCC379870.1146122036185197No Hit
CTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAT378680.114253163625085No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCC370680.11183944938350722No Hit
ACCTCTAGCATTACAAGTATTAGAGGC368980.11132653510717193No Hit
TCGCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAA367860.11098861511335105No Hit
TAACCTAGACTTACAAGTCAAAGTAAAAT365740.11034898083933294No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCG357690.10792018088374526No Hit
AGTTCAATTTTAAACTTGCTAAAAAAAC356030.10741933517861788No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGT347690.10490303808177302No Hit
CTCACCCCGAGTGTTACAGCCCTCCGGCC346430.10452287808872451No Hit
TATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG345850.10434788380621013No Hit
CCGCCTGGATACCGCAGCTAGGAATAA345640.1042845238073687No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG340870.10284534669082795No Hit
AATAAGTGGGAGGCCCCCGGCGCCCGGCCCCG337050.10169279814047454No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGCCT334520.10092946101157557No Hit
TGCGCCGCTGGTGTAGTGGTATCATGCAAGATT334300.10086308386993217No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)