FastQCFastQC Report
Thu 24 Aug 2023
SRR10919499.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR10919499.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95222633
Total Bases2.9 Gbp
Sequences flagged as poor quality0
Sequence length1-60
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG13998531.4700843233351886No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT7708550.8095291798957082No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT6539940.6868052052288871No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATT6347110.6665547674994452No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGATT5762330.605142897067339No Hit
AGAGTGGCGCAGCGGAAGCGTGCTGGGC4964940.5214033516590536No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT4592870.48232965790811516No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT4471840.46961944436046No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT4143030.435088788187573No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGC3996350.419684887310352No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG3960230.41589167146848377No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGAC3955180.41536133536656145No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC3866980.4060988315666507No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC3750810.3938990008814396No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC3680400.3865047503989939No Hit
TAACCTAGACTTACAAGTCAAAGTAAAAT3303550.3469290751496023No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCG3282540.34472266693150566No Hit
AAAAGCATCTGGCCTACACCCAGAAGATT3178930.33384185039285774No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCG3163070.332176279981672No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT2999410.3149891895973933No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG2890540.3035559833763471No Hit
AAGTTCAATTTTAAACTTGCTAAAAAAAC2877490.3021855108753399No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGT2850450.2993458498464331No Hit
TGCGCCGCTGGTGTAGTGGTATCATGCAAGATT2808800.2949718897186975No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCC2751350.28893866020276926No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGAT2476660.26009152676969144No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCTGGT2204820.23154369192878754No Hit
TATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG2162790.22712982532209544No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGC2085800.21904456265140243No Hit
AGAGTTGCGCAGCGGAAGCGTGCTGGGC2085070.21896790020498594No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC2038390.2140657043163257No Hit
TTTCCATAGTGTAGCGGTTATCACGTCTGCT2015640.21167656643142813No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGC2007080.21077762048440732No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG1988100.20878439687757847No Hit
ATTGGTGGTTCAGTGGTAGAATTCTCGCC1987610.20873293852313451No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1981450.20808603349583918No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1884200.19787312539446372No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC1871750.1965656631233879No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1849410.19421958222894342No Hit
GCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1828930.19206883304728614No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1800090.18904014132858518No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT1794500.18845309601972463No Hit
GCATTGGTGGTTCAGTGG1773780.18627714274609483No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGAT1742850.18302896539313296No Hit
TCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGGG1709460.1795224460974525No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCG1665310.17488594334500288No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGATT1654830.17378536466220168No Hit
CCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1651250.1734094036236112No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC1635490.17175433491741401No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGAT1624740.1706254016311437No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGAC1617060.16981887068802226No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG1576760.16558668357763223No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGA1530060.1606823873479743No Hit
AATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG1509800.15855474191729188No Hit
GGGGATGTAGCTCAGTGGTAGAGCATGCTT1478570.15527505944936432No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC1466900.15404951047719925No Hit
CCGCCGCTGGTGTAGTGGTATCATGCAAGATT1459060.15322617680609607No Hit
CCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1446510.1519082128300317No Hit
TCGGGAGACCGGGGTTCGATTCCCCGACGGGGAG1397540.14676552789713346No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC1397500.14676132721513802No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCG1391850.14616798088328434No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1389780.14595059559002113No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGC1383610.14530264039222693No Hit
ACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAAC1376290.14453391558706427No Hit
TTCCCGGGGAGCCCGGCGGGTGCCGGCGCGGG1362180.14305212501317832No Hit
TGCCGCTGGTGTAGTGGTATCATGCAAGATT1334790.1401757080168115No Hit
GGAGGCGTGGGTTCGTATCCCACTTCTGACAC1328040.13946684293008366No Hit
CCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAA1311760.13775716535794594No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1308520.13741691011631657No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1285220.13497001285398189No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC1284680.13491330364704368No Hit
TGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1261810.1325115637161598No Hit
ATTCTTGCGACCCGGGTTCGGTTCCCGGGCGGCG1245940.13084494313447517No Hit
TGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGCGC1245340.13078193290454382No Hit
CGGGAGGCCCGGGTTCGTTTCCCGGCCAATGC1239110.13012767668375647No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGCC1213970.12748754804963228No Hit
ATTGGTGGTTCAGTGG1205850.12663480960456114No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC1202620.1262956045334306No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCG1199470.12596480082629097No Hit
TCCGCTGGTGTAGTGGTATCATGCAAGATT1179550.12387286119256963No Hit
AACCTAGACTTACAAGTCAAAGTAAAAT1160140.12183448025428996No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1155530.12135035165431732No Hit
GCGAAAGGTCCCCGGTTCGTAACCGGGCGGAAA1145880.12033693712292118No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCC1135830.11928151577157081No Hit
GCCGTGATCGTATAGTGGTTAGTACTCTGC1125640.11821139203323647No Hit
TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCG1125500.11819668964625249No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTC1092930.1147762843314782No Hit
GCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC1067540.11210990143488261No Hit
CGGGAGGCCCGGGTTCGTTTCCCGGCCAATGCAC1065470.1118925161416194No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGG1042420.10947187314175612No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATTT1022450.10737468265554051No Hit
TTCCCACATGGTCTAGCGGTTAGGATTCCTGGT1020120.10712999292930704No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC1009190.10598215657405734No Hit
AAAAAAGTAAGTTTAGATTATAGCCAAAAGAGG1000650.10508531096803425No Hit
ATTCTTGCGACCCGGGTTCGATTCCCGGGCGGCG987600.10371483846702706No Hit
CGTGATCGTATAGTGGTTAGTACTCTGCGT983480.10328216822149834No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCC973570.10224144925713195No Hit
ACCTCTAGCATTACAAGTATTAGAGGCAC964170.10125428898820725No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)