FastQCFastQC Report
Wed 30 Aug 2023
SRR11050271_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11050271_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15261151
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG638440.4183432822334305No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGGCCTTATCTCGTAT380480.2493127811919298TruSeq Adapter, Index 20 (97% over 44bp)
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG218480.14316089264826748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)