FastQCFastQC Report
Wed 30 Aug 2023
SRR11050274_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11050274_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20492401
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG642630.31359429283079127No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTAT303720.14821103686190798TruSeq Adapter, Index 7 (97% over 36bp)
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG248080.12105950883939856No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG210580.10276004261286903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)