FastQCFastQC Report
Wed 30 Aug 2023
SRR11050321_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11050321_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41930042
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTAT1109950.2647147360357998TruSeq Adapter, Index 7 (97% over 36bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1025760.24463605354843196No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG434730.10367983890881864No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)