FastQCFastQC Report
Thu 31 Aug 2023
SRR11050324_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11050324_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51375966
Total Bases3.9 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTAT719630.14007133218672715TruSeq Adapter, Index 15 (97% over 40bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG558890.10878432923285569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)