FastQCFastQC Report
Wed 30 Aug 2023
SRR11093242_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11093242_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47624439
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length16-148
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAGTAAAACGCGGCGTGTTCGAAT6598561.3855407304640375No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATT4940591.037406445879604No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAAT1927060.40463678742756426No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAATT1684750.3537574479355022No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA1316080.2763455124374274No Hit
GAGAATTTCTGGAAGGGCTCCCTTCGGGGTAAAGCCTA1006790.21140196528089283No Hit
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTC817860.17173115677016165No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATTC762690.16014676834303498No Hit
CTTCCCAGTAAAACGCGGCGTGTTCGAATT740590.15550629373292985No Hit
AACCGGAGTGAAGTGACGAACGTCGAA717830.15072723481320166No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAC630930.1324803007128336No Hit
AACCGGAGTGAAGTGACGAACGTCGAAAGC607030.12746186889466563No Hit
GGGTCTGTAGCTCAGTCGGTTAGAGCACCGTC604850.12700412072045614No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAATTC514540.10804116768703564No Hit
GTGGCACAAGCCAGGGGGTAGCGACTGTTTATC499420.10486632713930762No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATC483090.10143741535727066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)