FastQCFastQC Report
Wed 30 Aug 2023
SRR11093244_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11093244_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37718730
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length16-147
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAGTAAAACGCGGCGTGTTCGAATT5095191.3508381644875107No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAT4547531.2056423957010218No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAATT1873360.49666571488488614No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAAT1361620.3609930663094966No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATTC1134120.30067820417071306No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAATTC741250.19652040246317942No Hit
CTTCCCAGTAAAACGCGGCGTGTTCGAATT723730.19187549527781025No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATC673460.17854789914718763No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA607350.16102079789006682No Hit
TCCCAGTAAAACGCGGCGTGTTCGAAC602150.15964217246975176No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)