FastQCFastQC Report
Wed 30 Aug 2023
SRR11093245_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11093245_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44605656
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length16-147
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCAGTAAAACGCGGCGTGTTCGAAT2605880.5842039404150899No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATT1678350.3762639428506555No Hit
GAGAATTTCTGGAAGGGCTCCCTTCGGGGTAAAGCCTA1598710.35840970481411594No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAAT1280950.2871721021208611No Hit
CTTCCCAGTAAAACGCGGCGTGTTCGAATT1091100.2446102350787084No Hit
GAGAATTTCTGGAAGGGCTCCCTTCGGGGTAAAGCCCTAC927350.20789964393753113No Hit
TTCCCAGTAAAACGCGGCGTGTTCGAATT924440.20724726030259483No Hit
AAGACGATGTCAACGGCGCTTCTGAGCTT821150.18409100406459664No Hit
TTTTGGATGAGATCTTGATATCTGACA776290.17403398349303506No Hit
TCCCAGTAAAACGCGGCGTGTTCGAA588820.13200568107327018No Hit
AAGACGATGTCAACGGCGCTTCTGAGCT551740.12369283393119475No Hit
TCCCAGTAAAACGCGGCGTGTTCGAATTC539430.12093309422464271No Hit
GAGAATTTCTGGAAGGGTTCCCTTCGGGGTAAAGCCCTAC461520.10346669938000688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)