FastQCFastQC Report
Fri 1 Sept 2023
SRR11273551_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11273551_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71025227
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGTCGACGAAGCCGAGCGCACGGGGTCGGCGGCGATGTCGTGGAATTCT1340900.18879207524391298No Hit
CCGTCGACGAAGCCGAGCGCACGGGGTCGGCGGCGATCGTCTGGAATTCT734770.10345197488773955No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)