FastQCFastQC Report
Fri 22 Sept 2023
SRR11453098_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11453098_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440954360
Total Bases23.6 Gbp
Sequences flagged as poor quality0
Sequence length47-75
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT31687940.7186217639394699No Hit
ATTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT22001930.49896161589149496No Hit
TTTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT21459380.4866576214372843No Hit
TTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG19941580.4522368255980052No Hit
GTTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT19770570.4483586464594658No Hit
CTTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT19753590.4479735725937714No Hit
TCTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT18089570.4102367873173995No Hit
TGTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT16432210.3726510380802222No Hit
TTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG15478760.3510286189255505No Hit
ACTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT15027060.3407849283993926No Hit
ATTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT13935050.31602023393078593No Hit
AGTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT13846160.31400437904730094No Hit
ATTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG13602130.30847024621777186No Hit
TTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC13585830.3081005934491724No Hit
TGTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT13530960.306856246982114No Hit
CCTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT13196100.29926226378621135No Hit
CTTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT13013270.2951160296952274No Hit
GTTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT12847940.29136666207359874No Hit
GTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG12825070.2908480142933613No Hit
TATATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT12760800.28939049383704923No Hit
TGTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG12429460.28187633749669694No Hit
TCTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT12306080.27907831549732265No Hit
GCTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT12185600.2763460599414415No Hit
TATTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG11870300.2691956600678583No Hit
CTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG11714030.2656517558869358No Hit
AATATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT11395930.25843785737825564No Hit
GGTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT11061740.25085906849860834No Hit
TCTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG10819770.24537165252204335No Hit
TTTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA10634150.24116214657680218No Hit
ATATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG10417730.23625415564549582No Hit
CGTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT10266280.23281955982927577No Hit
ACTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT10004800.22688969443458956No Hit
GTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG9964630.22597871580178958No Hit
TGATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG9930270.2251994968368155No Hit
TGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC9830680.22294098645492472No Hit
TCATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG9737210.22082126594688847No Hit
TATTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT9620490.21817427998670882No Hit
AGTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT9574260.2171258721650921No Hit
TAATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG9242340.20959856253604114No Hit
AATTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG9223510.2091715342150149No Hit
CTATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG9194440.20851228231420593No Hit
ATTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC9087490.20608686123434633No Hit
AGTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG8922330.20234134888699137No Hit
CCTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT8913400.2021388335972004No Hit
ACTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG8822790.20008397240929876No Hit
GTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC8788560.19930770159523994No Hit
GGTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG8690280.19707889950334087No Hit
CTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC8573540.19443145998148198No Hit
GCTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT8530400.19345312743931142No Hit
CATATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT8329110.1888882559183676No Hit
GCTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG8222490.18647031860621585No Hit
TTTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA8191460.1857666176608391No Hit
TCTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC8012600.1817104155631889No Hit
AATTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT7953350.18036673908837186No Hit
GGTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT7856260.178164923916389No Hit
CCTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG7841620.17783291676716836No Hit
CGTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG7708250.17480834070900217No Hit
ATTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA7461300.16920798787430066No Hit
CGTTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT7319780.1659985854318347No Hit
ACATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG7265820.1647748760211828No Hit
CATTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG7238250.16414964124631853No Hit
ATTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA7235220.1640809266519102No Hit
GGATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG7136840.16184985675161484No Hit
GATTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAAG7135090.16181017010467932No Hit
AGATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG7042070.15970065473442646No Hit
GTTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA6901310.15650848763577255No Hit
AAATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG6900270.15648490242845087No Hit
TGTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA6795300.15410438395483833No Hit
GCATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG6778690.15372770098021027No Hit
TATTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC6661060.1510600779636242No Hit
GATATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTT6659650.1510281018652361No Hit
ACTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC6459140.1464809192497836No Hit
CTTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA6419750.14558762952247484No Hit
CCATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG6381130.14471180191981775No Hit
CTTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA6337960.14373278903512826No Hit
AGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC6307280.1430370254191386No Hit
TATTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA6288140.1426029668920838No Hit
CGATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG6165980.1398326121551446No Hit
CATTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT5978880.13558954264563797No Hit
TTTTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG5877330.1332865832191794No Hit
ATGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT5857960.13284730873281309No Hit
TCTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA5848920.13264229885378614No Hit
CCTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC5703010.12933333962272195No Hit
GCTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC5626600.12760050722709715No Hit
CAATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG5588100.12672740099451563No Hit
GAATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTG5567170.12625274869716674No Hit
CTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT5557260.12602800888509186No Hit
TTTTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGA5477350.12421580319559601No Hit
TTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT5443660.12345177854687728No Hit
GGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC5378540.12197498171919652No Hit
TCTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA5360910.12157516709892606No Hit
AATTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC5319080.12062654284674722No Hit
ACGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT5219030.11835760054623339No Hit
ACTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA5098020.1156133256058518No Hit
TTATAAATCATTTGTATACGACTTAGATGTACAACGGGGTATTGTAAGCA5096660.11558248341166193No Hit
CGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATC4975820.11284206374555408No Hit
AATTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA4957160.11241889069880157No Hit
AGTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA4915200.11146731829570751No Hit
ACTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA4839340.10974695884626245No Hit
GATTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT4804030.10894619570152339No Hit
GTTGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAA4734370.1073664403726499No Hit
ATACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATCGTTTATTTGAT4727110.10720179748307739No Hit
TCGTTCCTTGTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAAT4723280.10711494042149851No Hit
TTTCTATGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTGTG4703690.10667067675666027No Hit
GGTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA4640480.10523719506934913No Hit
GCTTTGCTGGCTCCGGTGCGCTTGTGACGGCCCGTGAAAATCCACAGGAA4431560.10049928976776643No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)