FastQCFastQC Report
Tue 18 Jul 2023
SRR11453104_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11453104_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69672848
Total Bases6.5 Gbp
Sequences flagged as poor quality0
Sequence length87-107
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC17141182.460238169107139No Hit
TTCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG8558321.228357996790945No Hit
TCGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC7145151.025528624866892No Hit
TCGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT6712050.9633666762122313No Hit
ACGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT6315870.9065037789182955No Hit
ATCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG5977260.8579037848431287No Hit
ACGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG5752730.8256774575943846No Hit
CTCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG5486500.7874660154555473No Hit
CCGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC5484250.7871430776017654No Hit
CTGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC5191340.7451023101567485No Hit
TTTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG4940190.709055269277926No Hit
CTGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT4681150.671875792991841No Hit
ATGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC4425120.6351283357901488No Hit
CCGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT4149870.5956222716774833No Hit
ATGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT4103160.5889180818329689No Hit
TTGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT4049210.5811747497389514No Hit
TGCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG3845620.5519538974494053No Hit
ATTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG3699520.5309844661438269No Hit
CTGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG3642890.5228564791839714No Hit
TCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG3619890.5195553366786442No Hit
GTCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG3534520.5073023568664797No Hit
TTGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC3511220.5039581559806483No Hit
TTTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT3423840.4914166850191053No Hit
CTTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG3343470.479881344882012No Hit
ATGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG3341900.4796560060240397No Hit
TCCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG3292520.47256859659303724No Hit
TTATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC3252560.4668332203098688No Hit
ACCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG3063260.4396633822116759No Hit
GCGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC2963710.4253751762810098No Hit
TTGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG2948390.4231763283165918No Hit
TTCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA2877050.412937045432677No Hit
AGCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG2847530.40870010079105706No Hit
ATATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC2694380.3867187975436285No Hit
ATTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT2640820.37903144134426653No Hit
CCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG2631360.377673667079032No Hit
CCCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG2576910.3698585710175074No Hit
CTTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT2539120.36443465035331984No Hit
TCATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC2517380.3613143530461106No Hit
ACATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC2505840.3596580406760464No Hit
GTTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG2487330.3570013385989331No Hit
GCGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT2467740.35418962635200446No Hit
TCTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG2330840.334540652048557No Hit
ATCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA2289200.32856414883456464No Hit
TAGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT2179530.31282344020155456No Hit
ACTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG2052420.2945796043818964No Hit
CTATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC2008100.2882184463020659No Hit
TTCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTT1998010.2867702494377724No Hit
TGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT1958520.2811023312840606No Hit
CGCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG1933720.2775428384957078No Hit
CTCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA1917100.2751574042157714No Hit
GTATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1871870.26866563571507796No Hit
TCTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT1797210.25794984008691596No Hit
TTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGT1776240.2549400592896676No Hit
TGATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1731720.2485501956228343No Hit
ACTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT1728900.24814544684609421No Hit
TGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG1659090.2381257617027511No Hit
GGCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG1627100.23353430306164605No Hit
GTGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT1620720.2326185948362553No Hit
TACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG1580720.2268774774356863No Hit
ACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA1560090.22391649613634282No Hit
AGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT1522170.21847391684060335No Hit
GCATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1516280.2176285373033696No Hit
GCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG1511040.21687645092389507No Hit
CCTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG1487700.21352650892066302No Hit
GTGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC1485830.21325811168218645No Hit
CCATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1467740.2106616913377791No Hit
TGGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC1463920.21011341462602476No Hit
GTTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT1426950.20480718686854885No Hit
AGATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1357520.1948420423405112No Hit
TCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA1357420.19482768954700977No Hit
AACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG1335910.19174040366485376No Hit
TCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT1309450.1879426545043774No Hit
GTGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG1294970.1858643700053714No Hit
ATCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGT1278860.18355213497229222No Hit
CTCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTT1271060.18243261707918126No Hit
AGGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC1266830.18182549391407107No Hit
ATCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTT1265710.18166474262685514No Hit
AGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG1258450.18062272981865188No Hit
CCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA1237540.17762156069750443No Hit
CGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT1228820.1763699971041804No Hit
TGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT1183470.16986100525128528No Hit
TTAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT1183200.16982225270883142No Hit
CTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGT1183090.16980646463597987No Hit
TTTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTG1183000.16979354712182856No Hit
GCCCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG1141220.16379694999693423No Hit
TTTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGG1095130.1571817474721286No Hit
CCTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT1091680.15668657609632952No Hit
GGATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC1072760.15397102756586037No Hit
TATCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG1065690.1529562850653098No Hit
GTCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGA1042850.1496781070295849No Hit
TTATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGTGGG1037620.1489274559294605No Hit
TTTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGATAGCCT1022850.14680754832930037No Hit
GCTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG1021280.14658220947132805No Hit
AATCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG983910.14121857053984646No Hit
TAATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC983480.14115685352779034No Hit
ACAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT982810.14106068981133082No Hit
AAATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC981370.14085400958491032No Hit
TGGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG976150.14010479376413607No Hit
ACGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAG967950.1389278646970194No Hit
TTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTGT966340.1386967847216465No Hit
CGGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC963190.13824467172635171No Hit
CACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG941340.13510858634629086No Hit
GACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCG939070.13478277793380858No Hit
ATTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGG936620.13443113449302374No Hit
CGATGTACACGGAGTCGACCCGCAACGCGATGTACACGGAGTCGACCCGC923120.13249350737033172No Hit
TCATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGTGGG918360.13181031439966398No Hit
ACGGCAACTTGGCCGAGTGGTTAAGGCAAAGATTGGAAATCTTTTGGGCT882520.12666627320875415No Hit
CTTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGG880500.1263763467800254No Hit
ATAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT877660.125968727444585No Hit
ATTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTG872100.12517071212590591No Hit
ACATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGTGGG871510.12508603064424753No Hit
AGGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAG869850.12484777427212392No Hit
ATATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGTGGG867390.12449469555198892No Hit
TTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGATAGCCTG865220.12418323993300805No Hit
CGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG836920.12012139937210548No Hit
GGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAG829320.11903058706599735No Hit
CTAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT802020.115112274440109No Hit
ATTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTGT798540.11461279722625951No Hit
GGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT794380.11401572101660032No Hit
AGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGT794190.11398845070894761No Hit
TGCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGT791720.11363393670946248No Hit
ACTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCAGG789330.11329090494477849No Hit
ATTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGATAGCCT775910.11136476005688759No Hit
TCCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTT772150.1108250950212341No Hit
AAGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCT761140.10924485245672748No Hit
GGGGCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGC751380.10784401981098864No Hit
CTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTGT751280.10782966701748721No Hit
CTTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGTAGCCTG747010.10721680273497647No Hit
GTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACCGAGTAGTGTAGT736480.10570545357927667No Hit
TTACCGTTTCCCGTCCGATCAACTGTAGTTAAGCTGGTAAGAGCCTGACC707660.10156897849216671No Hit
CCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT707540.10155175513996499No Hit
ATTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGATAGCCTG706440.10139387441144936No Hit
GCAACTTGGCCGAGTGGTTAAGGCAAAAGATTGGAAATCTTTTGGGCTTT705080.10119867641983No Hit
CTTGGGCCAGCATCAGTTTTGGTGGCAGGATAAATCCATAGGATAGCCTG699530.10040209638050106No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)