FastQCFastQC Report
Wed 30 Aug 2023
SRR11542150_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11542150_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11265069
Total Bases345.2 Mbp
Sequences flagged as poor quality0
Sequence length18-37
%GC70

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC6120825.433450962439733No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5343874.743752568226613No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC3689003.2747247264974586No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTA3507253.113385279752836No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA2985792.650485318820506No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT1966441.7456084822915865No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTA1762221.5643224200402146No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT1641601.4572480647921464No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC1575931.3989528160013933No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1567931.3918512172450963No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1384211.2287630018067355No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTAT1277211.133779118441263No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTAT1211231.0752086826987033No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1206961.0714182043625298No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1147541.0186710796001337No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTATT1134381.0069889496460251No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTT1017370.9031191908367362No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC947740.8413086506616161No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTTATT928710.8244157226200745No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG918440.8152990452166782No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC887370.7877182110469098No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT840070.7457300084003037No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTAT792230.7032624478376475No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTC789370.7007236262822714No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG766120.6800846048967831No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC724000.6426946874448793No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTC658060.5841597596961013No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCT631500.5605824518251953No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC572560.508261422988177No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC570760.5066635632680102No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGT552430.4903920251176447No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC549560.4878443265638231No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG542680.48173695163340763No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTA530660.4710667995020714No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG523330.46455995964161423No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCC474420.4211425602453034No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTATT454660.4036016113172498No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG437880.3887060079259168No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG396000.35152913843670197No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTA395880.35142261445535755No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT394020.34977149274451846No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT383160.3401310724328453No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT372280.3304728981242813No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCG364960.3239749352622696No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC359610.31922574109399593No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCGC331980.2946985943894352No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTTA330060.2929942106879239No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC315100.2797142210136485No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGT305330.27104139353252077No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA304800.27057091261491606No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTT297510.26409958074824047No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG284920.252923439705518No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGG284090.25218664883455216No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG280690.24916846936312598No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG272900.24225328757418174No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC269110.23888890516338604No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT253930.22541362152331246No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCC235470.20902668239315714No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG226080.2006911808529535No Hit
TTCTCGCTTCTGGCGCCAAGCGCCCGGCCG223360.19827663727581252No Hit
TTAAACGATGCCGACCGGCGATGCGGCGGCGTTA221480.1966077615680827No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGA219850.1951608108214872No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCG215710.1914857334651035No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTT213930.18990562774182743No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC213630.1896393177884663No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCC212160.1883343990169967No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTAT210430.18679867828594748No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCTC209810.18624830438233445No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG202390.17966157153586898No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC201590.17895141166023928No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTT200250.17776189386855953No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGGA193620.17187644389927836No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC183690.16306158444302474No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC173110.15366972008782193No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG172050.15272875825261256No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTATT169470.1504384926537068No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGG168300.14939988383559835No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCTCT167000.1482458740377001No Hit
TCTCGCCGGCCGAGGTGGGATCCCGAGGCCT164980.1464527203517351No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTAT163120.14480159864089603No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC161550.14340790988497273No Hit
AACGATGCCGACCGGCGATGCGGCGGCG161230.14312384593472086No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG160220.14222726909173836No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCCG158620.14080694934047897No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTTA156880.13926235161098435No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG154600.1372383959654397No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG153950.13666139106649058No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTTAT153630.1363773271162387No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAG151570.13454866543649222No Hit
GTCGCGCCGTCGGGCCCGGGGG149660.1328531587334263No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTATT148950.13222289184380495No Hit
CGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG148490.13181454991531788No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC148140.13150385496972988No Hit
TCCTTCTGATCGAGGCCC146100.12969294728687414No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC143840.12768674563822024No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC141030.1251923090750709No Hit
TCGCGCCGTCGGGCCCGGGGG139300.12365658834402168No Hit
GGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC133910.11887188618196658No Hit
TTAAACGATGCCGACCGGCGATGCGGCGGCGTT132590.11770012238717757No Hit
ATGCCGACCGGCGATGCGGCGGCGTTA131130.11640408061415336No Hit
GCGCGCGGGTCGGGGGGCGGGGCGGACTGT129730.1151613008318014No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC124090.110154673708612No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCC123760.10986173275991473No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGA122900.10909831089361281No Hit
CTCGCCGGCCGAGGTGGGATCCCGAGGCCTCT122220.10849467499932756No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGG120080.10659499733201812No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCC120060.10657724333512737No Hit
AAAACGATGCCGACCGGCGATGCGGCGGC118930.10557414251080041No Hit
AGGGCGCACCACCGGCCCGTCTCGC118690.1053610945481115No Hit
CTTCTGGCGCCAAGCGCCCGGCCG116380.10331050790723076No Hit
TCCCGTGGATCGCCCCAGCTGCGGCGGGCGTCGC116170.10312409093987795No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGC114410.10156173921349262No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)