FastQCFastQC Report
Wed 30 Aug 2023
SRR11853189_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11853189_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79639636
Total Bases4.1 Gbp
Sequences flagged as poor quality0
Sequence length52
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGATCGTAGATCGG1085450.1362951985365679No Hit
CCAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGATCGTAGATCGG1007380.12649229084874272No Hit
CTAGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCGATCGTAGATCGG856200.10750928093141963No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)