FastQCFastQC Report
Thu 31 Aug 2023
SRR11944048_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11944048_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33987754
Total Bases5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAGACGCACTCCACATTGGAGGAGGCAACAAGGAAGGTGAGCACAAGA850110.25012244115924814No Hit
CTGAAGTTGAGGTAAAGGAGGAAGAGAAGAAAGGGTTTATGGAGAAGTTG660310.19427879818125082No Hit
AAAAAATGGAGGCCGGGAAAACACCACCGACGACGACAACAACGACGGAG415380.12221460706111971No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)