FastQCFastQC Report
Fri 1 Sept 2023
SRR12122936_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12122936_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences369393165
Total Bases18.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTCGGGGACTAGATCGGAA4845100.13116376963823898No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTCGGGGACTAGATCGGAA3711930.10048724101324397No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)