FastQCFastQC Report
Thu 29 Jun 2023
SRR1223700.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1223700.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77123881
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC27

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGACCTCAAATCAGGTAGGAGTACCCGCTAAAAAAAAAAAAAAAAAAAA1128910.14637619183090642No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)