FastQCFastQC Report
Wed 28 Jun 2023
SRR1223701.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1223701.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16536415
Total Bases694.5 Mbp
Sequences flagged as poor quality0
Sequence length42
%GC25

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA235830.14261253119252268No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)