FastQCFastQC Report
Sat 2 Sept 2023
SRR12343675_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12343675_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14106725
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length72
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAAG10155577.199098302405413No Hit
TAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAAG4146822.9396050465292265No Hit
ATTGCGATGGTCCCTGCGGATGCTCTGTAGGCACCATCAATAGATCGGAA2924062.0728127896446553No Hit
AAAGTTCCCTGGAAAGGGGCGCCTGTAGGCACCATCAATAGATCGGAAGA1597761.1326229156661096No Hit
ACCGGGCCTAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAG1472991.044175738876316No Hit
AAATAAGCGGAGGAAAAGAAACTCTGTAGGCACCATCAATAGATCGGAAG1263890.8959485635397302No Hit
AAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAAGA1240030.8790346448236569No Hit
AAAGGCGGAGCGAATCCGGAAAGATTGCCTCCTGTAGGCACCATCAATAG1045480.7411216990477946No Hit
TAAGGCGGAGCGAATCCGGAAAGATTGCCTCCTGTAGGCACCATCAATAG1029690.7299284561086999No Hit
AAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCCTGTAGGCACCATCAAT940110.666426828338966No Hit
TAAGGCGGAGCGAATCCGGAAAGATTGCCTCTGTAGGCACCATCAATAGA876590.6213986591501571No Hit
ATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCCTGTAGGCACCATCAA862710.6115593803664564No Hit
AAAGGCGGAGCGAATCCGGAAAGATTGCCTCTGTAGGCACCATCAATAGA813090.5763846675964832No Hit
TAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCCTGTAGGCACCATCAAT777510.5511626546912909No Hit
AAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCCTGTAGGCACCATCAAT652970.46287852070555No Hit
AAGGTTTCCGTAGGTGAACCTGCGGAAGGATCCTGTAGGCACCATCAATA598770.4244571294896583No Hit
ACTTGGTGTGAATTGCACTGTAGGCACCATCAATAGATCGGAAGAGCACA594820.42165704655049274No Hit
TAAGTTCCCTGGAAAGGGGCGCCTGTAGGCACCATCAATAGATCGGAAGA586750.4159363707735141No Hit
TAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCCTGTAGGCACCATCAAT581240.41203043229381725No Hit
AGGAGGGCGCGGCGGTCGCTGCAAAACCTCTGTAGGCACCATCAATAGAT570710.40456590739523174No Hit
TAGGAGGGCGCGGCGGTCGCTGCAAAACCTCTGTAGGCACCATCAATAGA520910.3692635959090434No Hit
TAGGCCAAGGAAGTTTGAGGCCTGTAGGCACCATCAATAGATCGGAAGAG460860.32669524641615966No Hit
AGTAAGCGCGAGTCATCAGCTCGCGTTGACTCTGTAGGCACCATCAATAG433270.3071371987474059No Hit
AAAACGATGCCGACCAGGGATCAGCGGATGCTGTAGGCACCATCAATAGA429090.3041740730041877No Hit
TTAAGGCGGAGCGAATCCGGAAAGATTGCCTCCTGTAGGCACCATCAATA419430.2973262752339753No Hit
AGAGAGGGTGAGAGCCCCGTCGTGCCCGGCTGTAGGCACCATCAATAGAT406440.2881179012137828No Hit
TTAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAA403620.2861188546597456No Hit
TTAAGGCGGAGCGAATCCGGAAAGATTGCCTCTGTAGGCACCATCAATAG377940.26791477114638584No Hit
TAGACCCGGGTTCGTTTCCCGGCTGGTGCACCCTGTAGGCACCATCAATA340820.24160108033579727No Hit
AAAAAACCTAGGGCGCGAGCCCGGGCGGAGCCTGTAGGCACCATCAATAG331390.23491632536963752No Hit
TCAACGAGGAATTCCTCTGTAGGCACCATCAATAGATCGGAAGAGCACAC328770.23305905516695052No Hit
TAGACCCGGGTTCGTTTCCCGGCTGGTGCACCACTGTAGGCACCATCAAT326960.23177597918723164No Hit
TGGAAAGGGGCGCCAGAGAGGGTGAGAGCCCCGTCTGTAGGCACCATCAA316900.22464462871431887No Hit
AAAAAGCCAGAGGAAACTCTGGTGGAAGCCTGTAGGCACCATCAATAGAT309880.2196682787819285No Hit
TCGGGCCTAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGA306010.21692490638330297No Hit
ATTGGAGCTGGAATTACCGCGGCTGTAGGCACCATCAATAGATCGGAAGA297990.21123967469416183No Hit
AGGCCAAGGAAGTTTGAGGCCTGTAGGCACCATCAATAGATCGGAAGAGC296130.20992115462660538No Hit
TGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTCTGTAGGCACCATCA291890.20691549597798212No Hit
AGCCGTACTGGAAGGTGCGGCTGGATCCTGTAGGCACCATCAATAGATCG280830.19907526374831863No Hit
AAAAAGATGAAAAGGACTTTGAAAAGAGAGCTGTAGGCACCATCAATAGA280030.19850815834291802No Hit
AAAAAGGGTGTTGGTCGATTAAGACCTGTAGGCACCATCAATAGATCGGA277630.19680684212671617No Hit
AAAAGGGTGTTGGTCGATTAAGACCTGTAGGCACCATCAATAGATCGGAA269130.19078134719433462No Hit
AAAAAAGATGAAAAGGACTTTGAAAAGAGAGCTGTAGGCACCATCAATAG262950.18640045793761487No Hit
ACGCTATTGGAGCTGGAATTACCGCGGCTGTAGGCACCATCAATAGATCG262830.18631539212680479No Hit
TATTGCGATGGTCCCTGCGGATGCTCTGTAGGCACCATCAATAGATCGGA261340.18525915830924614No Hit
ACGAATACGAACCGTGAAAGCGTGGCCTCTGTAGGCACCATCAATAGATC251350.17817742955930593No Hit
TACCGGGCCTAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATA236670.16777104537020465No Hit
AAAACAGAAAAGATAACTCTTCCTGAGGCACCATCAATAGATCGGAAGAG235990.1672890057756141No Hit
TTTGTCGCTAAGATTCGACTGTAGGCACCATCAATAGATCGGAAGAGCAC233680.16565148891751982No Hit
TAAGGGTTGGGCTGTTCGCCCATTCTGTAGGCACCATCAATAGATCGGAA232400.16474412026887883No Hit
AGACCCGGGTTCGTTTCCCGGCTGGTGCACCCTGTAGGCACCATCAATAG230210.16319166922159467No Hit
GAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAAG229450.16265291908646407No Hit
TAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGCTGTAGGCACCATCAA227740.16144073128242029No Hit
AAAGGGTTGGGCTGTTCGCCCATTCTGTAGGCACCATCAATAGATCGGAA216290.15332403516762394No Hit
AGACCCGGGTTCGTTTCCCGGCTGGTGCACCACTGTAGGCACCATCAATA214550.15209058091087763No Hit
ACTTGGTGTGAATTGCCTGTAGGCACCATCAATAGATCGGAAGAGCACAC211470.14990722510008525No Hit
TATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGAT207350.14698663226227207No Hit
AAGTTCCCTGGAAAGGGGCGCCTGTAGGCACCATCAATAGATCGGAAGAG204900.1452498719582327No Hit
AAAAAAGCCAGAGGAAACTCTGGTGGAAGCCTGTAGGCACCATCAATAGA201170.14260574300555232No Hit
AAGGCGGAGCGAATCCGGAAAGATTGCCTCCTGTAGGCACCATCAATAGA200410.14206699287042174No Hit
ATTGCGATGGTCCCTGCGGATGCTAACGCCTGTAGGCACCATCAATAGAT198050.14039403192448993No Hit
ACCGGGCCTAAGTTCCCTGGAAAGGGGCGCCTGTAGGCACCATCAATAGA197150.1397560383434142No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC193600.137239508106949No Hit
ATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTCTGTAGGCACCATCA193040.13684253432316856No Hit
CAAGTTCCCTGGAAAGGGGCGCCCTGTAGGCACCATCAATAGATCGGAAG188310.13348952361373742No Hit
TTAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCCTGTAGGCACCATCAA186480.1321922699988835No Hit
AAGGTAGCCGTACTGGAAGGTGCGGCTGGATCCTGTAGGCACCATCAATA182690.1295056081407981No Hit
AGAGAGAGGGTGAGAGCCCCGTCGTGCCCGGCTGTAGGCACCATCAATAG181850.12891014746512744No Hit
AAGGCGGAGCGAATCCGGAAAGATTGCCTCTGTAGGCACCATCAATAGAT181370.1285698842218871No Hit
AAACGAGGAATTCCTAGTCTGTAGGCACCATCAATAGATCGGAAGAGCAC177520.12584068945839663No Hit
AAAATAAGCGGAGGAAAAGAAACTCTGTAGGCACCATCAATAGATCGGAA176030.12478445564083798No Hit
AAACGAGGAATTCCTCTGTAGGCACCATCAATAGATCGGAAGAGCACACG174060.12338795858003895No Hit
AAAAGCCAGAGGAAACTCTGGTGGAAGCCTGTAGGCACCATCAATAGATC171280.12141726729627182No Hit
AAAAGGGTCGCGATCCCGCGAGGGTGAGCTCTGTAGGCACCATCAATAGA166510.11803590131657063No Hit
TCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCCTGTAGGCACCATCAAT162810.11541303881659279No Hit
TATGTACACGGAGTCAAGACCCGCAACGCGACTGTAGGCACCATCAATAG159310.1129319526679651No Hit
TAGAGAGGGTGAGAGCCCCGTCGTGCCCGGCTGTAGGCACCATCAATAGA157420.11159216614770615No Hit
AAAACTCAGCGGGTAATCCCGCCTGACCTGTAGGCACCATCAATAGATCG157070.11134405753284338No Hit
ATTGGATGGATGCCCGGGCATTGAGCTGTAGGCACCATCAATAGATCGGA153060.1085014416882728No Hit
TCGAAAGATGGTGAACTCTGTAGGCACCATCAATAGATCGGAAGAGCACA143840.10196555189103071No Hit
ATGTACACGGAGTCAAGACCCGCAACGCGACTGTAGGCACCATCAATAGA142250.10083842989779697No Hit
AAATTGTTGGTCTTCAACGAGGAATTCCTCTGTAGGCACCATCAATAGAT141970.10063994300590676No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)