FastQCFastQC Report
Sat 2 Sept 2023
SRR12415945_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12415945_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8762690
Total Bases657.2 Mbp
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTTCTCTTCAGATCGTATAAATCTTTCGCAACTGTAGGCACCATCAAT239390.2731923644451647No Hit
CTCATTAAATCAGTTATGGTTCCTTTGGTCGCTAACTGTAGGCACCATCA196520.22426903154168415No Hit
CATTAAATCAGTTATGGTTCCTTTGGTCGCTAACTGTAGGCACCATCAAT156670.17879212890105664No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAACTGTAGGCACCATC116050.13243650066360899No Hit
GGTTTCTCTTCAGATCGCATAAATCTTTCGCAACTGTAGGCACCATCAAT109270.12469915060329646No Hit
TTGGTGACTCTAGATAACCTCGGGCCGATCGCAAACTGTAGGCACCATCA91030.10388362477732295No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)