FastQCFastQC Report
Wed 30 Aug 2023
SRR12432008.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12432008.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58321828
Total Bases2.9 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAA11342291.9447761479629893No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA8777151.5049511136722258No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAA6053911.0380178755713898No Hit
CGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAAG5614030.9625949995943199No Hit
CCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA5222200.89541089144188No Hit
CCCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA5181490.8884306575575787No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTAAAAAA4271840.732459894775589No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA3847190.6596483909935059No Hit
CGCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA3421830.5867151489147425No Hit
CCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAA3386040.5805785099877184No Hit
GCCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA2990340.5127308423871763No Hit
CGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGAG2982870.511450018336188No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA2947260.5053442426393082No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA2752030.4718696403000263No Hit
CGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAAA2499980.42865254497852845No Hit
GCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAA2414200.41394450119087484No Hit
GGCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA2370850.4065116065977904No Hit
CCGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGA2323440.39838257470256244No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA2294560.3934307408883No Hit
GGGGGGCCGCCGGTGAAATACCACTACTCTCATAAAAAAAAAAAAAAAGA2232000.38270405378926053No Hit
GGGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAAAGATC2165500.3713018048748404No Hit
CCGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAAA2104580.3608563160948933No Hit
GGGGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAA2098810.35986697810637897No Hit
CCCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAA1869580.320562654517619No Hit
CCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAA1827550.3133560902789261No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCCCAAAAA1814260.311077355119939No Hit
CCGGGGGGGGATGCGTGCATTTACCAAAAAAAAAAAAAAAGATCGGAAGA1812120.31071042560600126No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCCAAAA1795420.3078470036981694No Hit
CGGGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAGATC1759600.3017052208994547No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA1746240.2994144833731892No Hit
CCGGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAG1727740.2962424291639144No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAGA1695240.2906699014989722No Hit
CGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA1632290.2798763440679534No Hit
GCGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCTAAAAA1483660.2543918890882501No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAGATCGGAAG1470570.2521474464072011No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCAAAAAAA1464370.2510843795911198No Hit
CGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAAA1399040.23988274167263757No Hit
CGGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAGAT1374850.23573506646602368No Hit
GCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAA1295620.22215010133084306No Hit
CCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTAAAAAA1290060.2211967704441637No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAAGATCGGA1239670.21255678062765798No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1227630.21049237345578403No Hit
CCGGGGCCGCCGGTGAAATACCACTACTCTCATAAAAAAAAAAAAAAAGA1224120.20989054046797023No Hit
CCGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAAA1214270.20820163592951854No Hit
CCGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAAAGATC1184410.20308176897335933No Hit
CGCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAA1182460.20274741731346282No Hit
CCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA1140650.1955785748005018No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA1063540.18235710993146512No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA1062350.1821530696877334No Hit
GCCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAA1047000.17952112200598377No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA1038630.17808598180427404No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG1018820.17468931186450465No Hit
GCGGGGCCGCCGGTGAAATACCACTACTCTCATAAAAAAAAAAAAAAAGA1011730.1734736435215988No Hit
CGGGGGGGTGGGGGCCGGGCCGCAAAAAAAAAAAAAAAGATCGGAAGAGC987110.169252239487418No Hit
GCGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAAAGATC986930.16922137625727368No Hit
CGGGGGCCGCCGGTGAAATACCACTACTCTCATAAAAAAAAAAAAAAAGA977280.1675667641967601No Hit
CGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA963530.1652091563385153No Hit
CCGGGGGGGGATGCGTGCATTTATCAGATAAAAAAAAAAAAAAAGATCGG958790.1643964246113822No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCAAAAAAAAAAAAA956860.16406550219927948No Hit
CGGGGGGGGATGCGTGCATTTATCAGATAAAAAAAAAAAAAAAGATCGGA951520.16314989303833205No Hit
CGGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAAAAAAAGATC950360.16295099666629104No Hit
CGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAGATCGGAAGA948070.16255834779389972No Hit
CCGGGGGGGGATGCGTGCATTTATCACAAAAAAAAAAAAAAAGATCGGAA939480.1610854858664581No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA913330.15660174437605076No Hit
GCGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTAAAAAA905150.15519918202838223No Hit
CGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTAAAAAAA903790.15496599317840312No Hit
CCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA901320.15454248107586752No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAAAAAAAAA890720.1527249797451479No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA879580.15081488872399543No Hit
CCGGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAA856090.1467872371901649No Hit
GCGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTCAAAAAA855830.14674265696884536No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA837250.14355688576839531No Hit
GGCCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAA829220.14218004277918037No Hit
CGCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA827360.141861122734356No Hit
CCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAAGATCGGAAG825090.1414719031097585No Hit
CCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAGATCGGAAGAG822350.14100209616200646No Hit
CGGGGGGGGATGCGTGCATTTACCAAAAAAAAAAAAAAAGATCGGAAGAG814030.13957552907978124No Hit
CGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAAGATCGGAA808580.13864105905596785No Hit
CCGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA795500.13639833099881574No Hit
CCGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCTAAAAAAA769450.13193173574737746No Hit
GGGGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAA769320.1319094456367177No Hit
CGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA761230.13052231490412133No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGAAAAAAAAAAAAAA759160.13016738775746192No Hit
GCCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG737020.1263712104497136No Hit
GCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAG718860.12325745345293361No Hit
CGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAA709540.12165942398101788No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA706960.12121705101561632No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCGACCGCCAAAAAA704040.12071638083771996No Hit
CGCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTGAAAAA676740.11603545759916853No Hit
CGGGGCTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAA650890.11160315482566835No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG648660.1112207936966585No Hit
GGCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA644830.11056409274414376No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG644680.11053837338569018No Hit
CGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCAAAAAAAAAAAAAAA643530.11034119163754606No Hit
CCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTAAAAAA634460.10878602776305296No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAAAAAAAAG630260.10806588572635276No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTAAAAAA611130.10478581021157293No Hit
CGCCCCCGCCCCTTGCCTCTCGGCGCCCCAAAAAAAAAAAAAAAGATCGG601030.10305404007569859No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAGGGTTTAAAAAA593170.10170634569273103No Hit
GCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAG590240.10120396089093778No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)