FastQCFastQC Report
Sat 2 Sept 2023
SRR12494972_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12494972_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32171552
Total Bases934 Mbp
Sequences flagged as poor quality0
Sequence length18-75
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCCAGCGGTGCCTCCA1209910.37608070633334695No Hit
ACGCAAATTCGTGAAGCGTTCCATATTTTT956870.2974273668861235No Hit
ATGACACGCAAATTCGTGAAGCGTTCCATATTTTT441490.1372299353167668No Hit
ATAGCTCAGTCGGTAGAGCATCAGA439400.1365802930489645No Hit
TTCGATTCCCCGACGGGGAGCCA436780.13576590896205443No Hit
ATCCCACCGCTGCCACCA404790.12582234142760662No Hit
GTCTAGGGGTATGATTCTCGCTT403630.12546177442729528No Hit
AAACAGGAGATCCTGGGTTCGAATCCCAGCGGTGCCTCCA389010.12091738688888866No Hit
TCCTGGGTTCGAATCCCAGCGGTGCCTCCA383660.11925442701676313No Hit
GTCTAGGGGTATGATTCTCGC379050.11782148402414655No Hit
TCCTCACACGGGGCACAATAATTT348780.10841255031774656No Hit
GTATAGTGGTGAGTATCCCCGCCTGTCACG344520.1070883990924653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)