FastQCFastQC Report
Tue 5 Sept 2023
SRR12763763.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12763763.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34338501
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length15-51
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGG580087016.89319519218384No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCG4956651.4434672031839713No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGG3302620.9617833929326152No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCGC2967620.8642252613181921No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGC2640450.7689473690188164No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCAG2590860.7545058533568486No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCG2194650.6391222493958021No Hit
CGCGGGATAGAGCAG2008230.5848333332896506No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGC1884210.5487164393110812No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCT1552810.45220669358863397No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGGCGG1231670.358684847658318No Hit
TGCGGGATAGAGCAGTCTGGTAGCTCGTCGG1180830.3438793091171918No Hit
GGCGGGATAGAGCAGTCTGGTAGCTCGTCGG1109150.3230047811347385No Hit
GAGGTTGTAGCTCAGACGGATAGAGCACTTG961420.27998310118429454No Hit
AGCAGGATGTCGGCGGTTCAAGTCCGCCTCCTGG845900.24634156278400157No Hit
TGGTCTGTAGTTCAATTGGTTAGAGCACTTG838960.24432050775891467No Hit
GGGCTTGTAGCTTAGTGGATTAGAGCACTTG833270.24266347561298615No Hit
AGAGCAGTCTGGTAGCTCGTCGG815270.23742154615310668No Hit
AGCAGGATGTCGGCGGTTCAAGTCCGCCTCCTGGCAC772960.2251000997393567No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTC752760.21921749001215865No Hit
GCGGGATAGAGCAGTCTGGTAGCTCGTCGG734550.2139144047085806No Hit
GGGGCTATAGCTCAGTTGGTAGAGCGCCTG697770.20320339551222694No Hit
AGCAGGATGTCAGCGGTTCGAGCCCGCTTAGCTC678010.19744892183849258No Hit
CCCGAAGGTCGGTGGTTCAAATCCGCCTCCCG614480.1789478230281514No Hit
CGCGGGATAGAGCAGT596100.17359523061300783No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGT595500.17342049963101183No Hit
CGGGATAGAGCAGTCTGGTAGCTCGTCGG578010.16832709150582897No Hit
CGCGGGATAGAGCAGTCTGG501970.14618285172087156No Hit
CGCGGGATAGAGCAGTCTG498370.1451344658288957No Hit
CGCGGGATAGAGCAGTCTGGTAG473430.13787148134392938No Hit
GGGTCTGTAGTTCAATTGGTTAGAGCGCACC461790.13448170029320733No Hit
GGACACGTAGCTCAGTGGATAGAGCACTTG455360.13260916660281705No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCC452810.13186655992933413No Hit
CGCGGGATAGAGCACTTG420150.1223553701426862No Hit
GGGTCTGTAGTTCAATTGGTTAGAGCGCACCC400150.11653100407615347No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCGCCAC397330.11570976846077236No Hit
GCCCTTGTAGCTCAGTGGTAGAGCACTTG393400.11456528052869866No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGT382680.11144342031703715No Hit
AGCAGGATGTCGGCGGTTCGAGCCCGCTTAGCTC375920.10947478458654908No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCC370720.10796044940925056No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCCG369020.10746537829359529No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCC368600.10734306660619809No Hit
ATAGAGCAGTCTGGTAGCTCGTCGG361830.10537151869267677No Hit
TCTGGTAGCTCGTCGG360000.10483858919758902No Hit
CGCGGGATAGAGCAGTCT352980.10279423670823604No Hit
CACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCG351710.10242438946301122No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCC344630.10036256387545862No Hit
AGCAGGATGTCGGCGGTTCAAGTCCGCCTCCTGGCACC343740.10010337958549792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)