FastQCFastQC Report
Tue 5 Sept 2023
SRR12763764.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12763764.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45311369
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length15-51
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGG835338218.435510081366115No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCG4868851.0745316478961384No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCAG3939180.8693579750371259No Hit
CGCGGGATAGAGCAG3473950.7666839640179488No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCG2926810.6459328121381634No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGG2896060.6391464358536596No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGC2888300.6374338413831637No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGC2241490.4946860025350371No Hit
AGAGCAGTCTGGTAGCTCGTCGG1951000.43057626442493935No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGGCGG1792620.39562256439437965No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCCCGC1671230.36883237846995975No Hit
GCGGGATAGAGCAGTCTGGTAGCTCGTCGG1570860.3466812048870119No Hit
GGCGGGATAGAGCAGTCTGGTAGCTCGTCGG1406260.3103547809380909No Hit
TGGTCTGTAGTTCAATTGGTTAGAGCACTTG1378320.30418855806365064No Hit
GAGGTTGTAGCTCAGACGGATAGAGCACTTG1265060.27919262382030435No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCT1161510.2563396396167152No Hit
TCTGGTAGCTCGTCGG1052130.2322000026086168No Hit
CGGGATAGAGCAGTCTGGTAGCTCGTCGG975570.21530358087393037No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCGT894380.1973853405312031No Hit
CGCGGGATAGAGCAGT884490.19520266536197572No Hit
CGCGGGATAGAGCACTTG882000.1946531344043037No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTC839660.18530890117224225No Hit
CGCGGGATAGAGCAGTCTGG813590.17955537825396536No Hit
TGCGGGATAGAGCAGTCTGGTAGCTCGTCGG801810.17695558922530016No Hit
AGCAGGATGTCAGCGGTTCGAGCCCGCTTAGCTC793190.17505319691400187No Hit
CCCGAAGGTCGGTGGTTCAAATCCGCCTCCCG782750.17274913940472644No Hit
CTGGTAGCTCGTCGG750210.16556771877715723No Hit
GGACACGTAGCTCAGTGGATAGAGCACTTG713050.15736668649318453No Hit
AGTCTGGTAGCTCGTCGG687350.1516948207854854No Hit
CGCGGGATAGAGCAGTCTG682320.1505847241119552No Hit
GGGGCTATAGCTCAGTTGGTAGAGCGCCTG646010.14257128271714764No Hit
CGCGGGATAGAGCAGTCTGGTAG642260.1417436758531838No Hit
CGCTGGATAGAGCAGTCTGGTAGCTCGTCGG625430.13802937624771391No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTAGG600770.13258703351028744No Hit
ATAGAGCAGTCTGGTAGCTCGTCGG593310.13094064758890867No Hit
GGGTCTGTAGTTCAATTGGTTAGAGCGCACC589650.13013290328967989No Hit
GGGCTTGTAGCTTAGTGGATTAGAGCACTTG563370.12433303438702106No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGTCCG560790.12376364086461392No Hit
ACCCGAAGGTCGGTGGTTCAAATCCGCCTCC549810.12134040796692767No Hit
AGGGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCAGCAGGATGTCAGCG521860.11517197814085026No Hit
AGCAGGATGTCGGCGGTTCAAGTCCGCCTCCTGG507840.11207783194544396No Hit
AGGGTGAGGTCTCTGGTTCAAGTCCAGAATGGCCCAGCAGGATGTCGGCG491980.10857760664878609No Hit
CGCGGGATAGAGCAGTCT481440.1062514796231383No Hit
CCGCGGGATAGAGCAGTCTGGTAGCTCGTCGG470780.10389886917784365No Hit
CGCGGGATAGAGCAGTCTGGTAGCTCGCCGG461740.1019037848977814No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)