FastQCFastQC Report
Tue 5 Sept 2023
SRR12764810_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12764810_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16709968
Total Bases530.9 Mbp
Sequences flagged as poor quality0
Sequence length15-42
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGGATAGCTCAGTCGGTAGAGCATCAGA9188525.4988256111561675No Hit
CCCGCGAGGGGGGCCCGGGC8215984.916813724598396No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGTC5425163.246660915209413No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGTCG1672311.0007858782255No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGC1620770.9699420130547228No Hit
GGGGGGTCTCCCCCGCGGGGGCGCGCCGGC1587570.9500736326963642No Hit
CCCGCGAGGGGGGCCCGGG1176160.7038672964544277No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGC1082730.6479545622110108No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGA993110.594321904147273No Hit
CCGCGAGGGGGGCCCGGGC988050.591293771478198No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT967510.5790017072444423No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTA924320.5531548594228307No Hit
CGCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGA897190.5369190413769793No Hit
GGGGGTGTAGCTCAGTGGTAGAGCGTGCTT886710.530647335769883No Hit
TCCGTAGTGTAGTGGTTATCACGTTCGC825320.49390878546266515No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA805730.48218524416085057No Hit
CCCGCGAGGGGGGCCCGG782220.4681157977082901No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC780280.4669548140367474No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGATT771960.4619757500433274No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGA762900.456553836608185No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGA722940.43263996675517274No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG719710.4307069887865733No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGGA689810.41281347756022035No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC654840.391885849212877No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGC627530.37554231103255253No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGC611310.36583553002614966No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGA610680.3654585095554941No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTATT589200.35260390684171267No Hit
CCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGA581900.3482352569436399No Hit
TGGGAAACTCGACTGCATAATTTGTGGTAGTGGGGGA562520.33663738913204383No Hit
TTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG526330.31497965765104996No Hit
TAATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGG508400.3042495353671533No Hit
TTCCGTAGTGTAGTGGTTATCACGTTCGC504320.30180787898576467No Hit
TCCCTGGTGGTCTAGTGGTTAGGATT494340.29583539597442676No Hit
TAATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGGG487430.2917001397010455No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTAT483370.2892704522234872No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC483060.289084934214117No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC479660.2870502205629598No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG432730.2589651877250752No Hit
TAATCTCAGGGTCGTGGGTTCGTGCCCCACGTTGGGC428650.25652353134368655No Hit
TCTAAAGGTCCCTGGTTCGTTCCCGGGTTTCGG424360.2539562014720794No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCG416050.2489831219305746No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG410870.2458831758385175No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTATT401910.24052110692252673No Hit
GTTTCCGTAGTGTAGTGGTCATCACGTTCGC397590.23793582369517405No Hit
AGGTCGCTGGTTCGTTTCCGGCTCGAAGGA397030.23760069438792464No Hit
CATGGGTGGTTCAGTGGTAGAATTCTCGC390840.2338963186524355No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCG388280.23236429896215238No Hit
CGTGATCGTATAGTGGTTAGTACTCTGCG384640.23018595846503115No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTA383730.22964137334075085No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT383350.22941396416797447No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCG374510.22412370867496575No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC374090.22387236169452868No Hit
CCCCCGCGGGGGCGCGCCGG373800.2236988125889888No Hit
CGCGCGGGTCGGGGGGCGGGGCGGACTGT370220.22155637880335857No Hit
TGGGTGGTTCAGTGGTAGAATTCTCGC349480.20914462553129962No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC340440.20373468099998757No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGGT331480.1983726120839968No Hit
GGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG330770.19794771599801986No Hit
CTGTCCCCGCCGGCGGGC329440.19715178389330248No Hit
CGCCGCTGGTGTAGTGGTATCATGCAAGA329180.19699618814350814No Hit
CGTGATCGTATAGTGGTTAGTACTCTGCGT322500.19299857426417572No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCTC319760.19135883443941962No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT318280.19047313555597473No Hit
TAATCTCAGGGTCGTGGGTTCGGGCCCCACGTTGGGC316860.18962334338402084No Hit
TCCGTAGTGTAGTGGTTATCACGTTCGCCT307550.1840518186509992No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCG306880.18365086037268294No Hit
GGGGATGTAGCTCAGTGGTAGAGCATGCTT306630.18350124907480372No Hit
CCCCCGCGGGGGCGCGCCGGC297610.17810327344732196No Hit
TCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG295950.17710985442940405No Hit
TTGGTGGTTCAGTGGTAGAATTCTCGC295910.1770859166217434No Hit
CGTCGCGCGCGCGTCCGCTGGGGGCGGGGAGCGGT295080.17658920711278442No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCC290740.17399195498160142No Hit
CTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGATCG290160.17364485677052163No Hit
GGTAGCGTGGCCGAGCGGTCTAAGGCTCTGGATT278380.16659517241445346No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT275150.16466219444585412No Hit
TAATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGGGC266400.15942579902008192No Hit
GTCAGGATGGCCGAGCGGTCTAAGGCTGCGTT252180.15091590839671265No Hit
CGCAGCAACCTCGGTTCGTATCCGAGTCACGG251630.15058676354137843No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCT250090.1496651579464425No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTTA247760.1482707806502083No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGTTAT247090.14786982237189203No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG244620.1463916627488455No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTGGACT243710.14584707762456517No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGCCCGGCCGC237030.14184946374523277No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC236400.1414724432745772No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGA229210.13716962234757124No Hit
GCGCGCGGGTCGGGGGGCGGGGCGGACTGT228320.13663700612712126No Hit
GGTAGCGTGGCCGAGCGGTCTAAGGCCTGGATT221440.1325197032094855No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCG220080.13170581774902262No Hit
GCCGTGATCGTATAGTGGTTAGTACTCTGCG214520.12837846248418908No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTT212160.12696613183220937No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCTCT206460.12355499424056347No Hit
GGGGGTCTCCCCCGCGGGGGCGCGCCGGC206440.12354302533673314No Hit
TCGTTGGTCTAGGGGTATGATTCTCGCTT206180.12338742958693877No Hit
TCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGA206140.12336349177927809No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTC204860.12259748193413655No Hit
ATGGGTGGTTCAGTGGTAGAATTCTCGC201290.1204610326004215No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGGC199200.11921028215015134No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA197490.11818694087265758No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTAT197390.11812709635350589No Hit
CCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC195070.11673870350918684No Hit
GGGGGTGTAGCTCAGTGGTAGAGAGCGTGCTT194250.11624797845214306No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGTTA188700.11292660763922467No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAG186920.11186137519832474No Hit
GCTTCTGTAGTGTAGTGGTTATCACGTTCGC185470.11099362967062534No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCTGG185460.11098764521871017No Hit
CGCGGGTCGGGGGGCGGGGCGGACTGT185050.11074228269018828No Hit
TAATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGGGCG183150.10960523682630632No Hit
TCGTCGCGCGCGCGTCCGCTGGGGGCGGGGAGCGGT182020.1089289937598923No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTGGA178680.1069301868202261No Hit
TCTTGGTCTAGGGGTATGATTCTCGCTT176690.10573928088910761No Hit
CCCAGGTGGCCCGGGTTCGACTCCCGGTATGGG175150.10481767529417173No Hit
TTTCCGTAGTGTAGTGGTTATCACGTTCGC172590.10328565560388865No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGG172150.10302233971962124No Hit
CTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGG168010.10054477662674159No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)