FastQCFastQC Report
Tue 5 Sept 2023
SRR12765224_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12765224_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15840110
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGACGCGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAGATATGGA200290.1264448289816169No Hit
GGGTCGCGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAGATATGGA190460.12023906399639903No Hit
TTGCCGCGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAGTTATGGA161250.10179853548996819No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)