FastQCFastQC Report
Fri 29 Sept 2023
SRR12925970_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925970_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9823901
Total Bases357.1 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN857751587.31271823687963No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC1479431.5059496222529116No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1367771.3922880533914175No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG428930.43661881364643235No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGA414670.4221031950545919No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC291710.29693906728091013No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC253910.25846148083129095No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG241660.2459918926300255No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC195340.19884158034573027No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG166310.16929120112264975No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC153080.15582404586528306No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG147220.14985900204002464No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC120290.1224462665085896No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG101720.10354338872103862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)