FastQCFastQC Report
Fri 29 Sept 2023
SRR12925972_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925972_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9907962
Total Bases360 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN866524987.45743070068295No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC1468291.4819293816427637No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1340711.3531642531531711No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG435110.4391518659437733No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGA418490.4223774778304559No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC293790.2965191025157343No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC256600.25898363356662046No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG239610.24183580841347596No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC190300.1920677531867805No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG166370.16791546031363463No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC149490.15087865698314143No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG144430.1457716531411808No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC121620.12274976428048473No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG101150.10208961237437124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)