FastQCFastQC Report
Fri 29 Sept 2023
SRR12925973_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925973_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9898284
Total Bases359.1 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC71

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN866129587.50299546870951No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC1516321.5319018932978685No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1356521.3704597685821098No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG442030.44657235536988027No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGA422630.4269729985520722No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC294740.2977687849732338No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC256260.2588933596974991No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG237850.24029417624307406No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC190830.19279099286300536No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG167660.16938289505534493No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC150380.151925323621751No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG142370.14383301186347047No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC123410.12467817654049934No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG101940.10298754814470873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)