FastQCFastQC Report
Fri 29 Sept 2023
SRR12925974_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925974_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9005067
Total Bases332.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN809921389.94061898706583No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1297311.4406444727174157No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC286080.31768780843052025No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC194080.21552310493636526No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG169040.18771653781143438No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG155250.1724029371463866No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG151490.1682275101340168No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC146530.16271950003259275No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC129840.144185490235664No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC102530.11385812010060559No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)