FastQCFastQC Report
Fri 29 Sept 2023
SRR12925976_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925976_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9155893
Total Bases338.4 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN823737989.96805663849501No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1293131.4123472172512281No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC289300.31597136401659565No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC193970.2118526286840617No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG169640.18527957895532418No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG159850.17458701188404016No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG154050.16825229390513846No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC149180.162933315188371No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC128770.14064166105916703No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC101470.11082479884812982No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)