FastQCFastQC Report
Fri 29 Sept 2023
SRR12925977_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925977_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9088980
Total Bases335.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN817907089.98886563728823No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC1299001.4292032769353658No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC291740.3209821124042522No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC195150.21471056158116752No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG168650.18555437463829824No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG155290.17085525548521396No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG153870.169292923958464No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC145840.16045804919803983No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC127810.1406208397421933No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC103040.11336805670163208No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)