FastQCFastQC Report
Fri 29 Sept 2023
SRR12925980_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925980_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9578197
Total Bases355.3 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN853344289.09236258139188No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC921320.9618929324590004No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC920140.9606609678209792No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC262850.27442534330834917No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG221560.23131702135589818No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG174560.18224724340081958No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC164790.17204699381313623No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG153380.16013452218616928No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG130570.13632001931052368No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC110750.11562718954308417No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC102500.10701387745522462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)