FastQCFastQC Report
Fri 29 Sept 2023
SRR12925981_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925981_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9602060
Total Bases355.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN856307089.17950939694191No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC953390.9929015232148102No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC926360.9647513137805847No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC262000.2728581158626378No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG228020.2374698762557201No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG173640.18083619556636804No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC164030.17082792650743694No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG154290.16068426983376483No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG133120.13863691749478757No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC111290.11590221265020215No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC103070.10734154962580945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)