FastQCFastQC Report
Fri 29 Sept 2023
SRR12925982_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925982_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10244886
Total Bases384.3 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN893308387.1955334593279No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC856290.8358218920151967No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC631450.6163562971808568No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG543370.5303816948280342No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG430530.42023893677294216No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC306340.29901748052638166No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC296060.2889832058648578No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC198740.19398946947774726No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG144150.14070434751543356No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG109120.10651167811920992No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)