FastQCFastQC Report
Fri 29 Sept 2023
SRR12925983_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925983_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9856864
Total Bases369.4 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN860001887.24902768263821No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC827690.839709262499716No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC607190.6160072818291903No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG538220.5460357371269401No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG411530.417506014083181No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC294160.29843163099338693No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC281370.2854559015930421No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC195410.19824763738243725No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG137230.13922277917195572No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG102960.10445512893350259No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)